Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2c14
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    29   0.21 
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    29   0.21 
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    26   1.1  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    25   2.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.5  

>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 28.7 bits (61), Expect = 0.21
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 459 RDFFTRVAETKLYVSFAIVAYVIGILTKTPG 551
           RD F ++    + V  AIV Y IGI+  TPG
Sbjct: 447 RDRFPQLQPALVAVGIAIVGYGIGIIYTTPG 477


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 28.7 bits (61), Expect = 0.21
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 459 RDFFTRVAETKLYVSFAIVAYVIGILTKTPG 551
           RD F ++    + V  AIV Y IGI+  TPG
Sbjct: 447 RDRFPQLQPALVAVGIAIVGYGIGIIYTTPG 477


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 20/65 (30%), Positives = 26/65 (40%)
 Frame = +2

Query: 14   FYFINTRDNFRDNIAEHVFDMLLERHGSFENYPIVNTAFINSLIVNGFKYNQVDDHVVCE 193
            +Y + T  N     A   F + L+R      Y   NT       +N  K  +VD   VCE
Sbjct: 1274 YYKMGTERNCFTVTAYRRFKVALKRPAYVVVYDYYNTN------LNAIKVYEVDKQNVCE 1327

Query: 194  YCEAE 208
             CE E
Sbjct: 1328 ICEEE 1332


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/48 (22%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -3

Query: 307 KRFVLSNLVGIRAIRRQGYVCIFNTLVFGPIF---YFCFTILAHNVIV 173
           K+FV+ N+V   A+R      ++++ V   ++   ++C +   H+ +V
Sbjct: 36  KKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSCAIHSKVV 83


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 298 RIVWRQHYHQRCTSKRRQTQVCVQMHVQFT 387
           R+ W  HY +RC   R +T   +   ++F+
Sbjct: 203 RLCWELHYLERCLRARIETASDITSVLRFS 232


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,826
Number of Sequences: 2352
Number of extensions: 16554
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)