Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2c11
(787 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 25 0.91
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 25 0.91
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 24 1.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 24 1.6
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 23 2.8
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 8.4
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 8.4
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 8.4
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 8.4
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 8.4
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 21 8.4
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 8.4
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 24.6 bits (51), Expect = 0.91
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 411 WNLVPVVVKLLYLASC 458
WNL+P+ V +L A+C
Sbjct: 922 WNLLPIAVFILVCATC 937
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 24.6 bits (51), Expect = 0.91
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 411 WNLVPVVVKLLYLASC 458
WNL+P+ V +L A+C
Sbjct: 922 WNLLPIAVFILVCATC 937
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 409 DETENTIASTTYSETSDKLVS*RFGLG 329
DET+N + TY+E +KL LG
Sbjct: 340 DETKNHYSKNTYNEQGNKLADLYKSLG 366
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 409 DETENTIASTTYSETSDKLVS*RFGLG 329
DET+N + TY+E +KL LG
Sbjct: 232 DETKNHYSKNTYNEQGNKLADLYKSLG 258
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +2
Query: 608 DQQGKNGPKKPQP--DHILVTEP 670
D Q +N PK+P+P D VT P
Sbjct: 322 DHQRRNEPKRPRPNIDRHEVTRP 344
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 8.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 35 VNNISKKRKFVGDGVFKAELNEF 103
VNN S +R+F+ V E N F
Sbjct: 1915 VNNPSARRRFIAHVVDFIETNNF 1937
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 35 VNNISKKRKFVGDGVFKAELNEFL 106
+N++ K+R+ V + +FK E++E L
Sbjct: 75 LNDLEKRRE-VYESIFKVEVHEAL 97
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 35 VNNISKKRKFVGDGVFKAELNEFL 106
+N++ K+R+ V + +FK E++E L
Sbjct: 235 LNDLEKRRE-VYESIFKVEVHEAL 257
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 35 VNNISKKRKFVGDGVFKAELNEFL 106
+N++ K+R+ V + +FK E++E L
Sbjct: 235 LNDLEKRRE-VYESIFKVEVHEAL 257
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 443 QQLHNH--GHQIP**NGEHHSKHDVQRDL 363
Q ++NH GH + + +HH H Q+ +
Sbjct: 160 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 188
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 631 EEATTRPHPGNRAQGRARAPR 693
EEA P P RA G A A R
Sbjct: 271 EEAERAPAPAVRAAGDAAAAR 291
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 443 QQLHNH--GHQIP**NGEHHSKHDVQRDL 363
Q ++NH GH + + +HH H Q+ +
Sbjct: 162 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 190
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,816
Number of Sequences: 336
Number of extensions: 4232
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -