Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2c09
(808 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 168 2e-41
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 168 2e-41
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 168 2e-41
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 168 2e-41
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 168 2e-41
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 168 2e-41
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 168 2e-41
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 168 2e-41
U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein. 30 8.6
L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein. 30 8.6
BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein. 30 8.6
BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein. 30 8.6
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 168 bits (408), Expect = 2e-41
Identities = 95/227 (41%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Frame = +3
Query: 177 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 356
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 357 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 536
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 537 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 662
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 663 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 803
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 168 bits (408), Expect = 2e-41
Identities = 95/227 (41%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Frame = +3
Query: 177 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 356
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 357 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 536
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 537 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 662
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 663 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 803
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 168 bits (408), Expect = 2e-41
Identities = 95/227 (41%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Frame = +3
Query: 177 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 356
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 357 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 536
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 537 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 662
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 663 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 803
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 168 bits (408), Expect = 2e-41
Identities = 95/227 (41%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Frame = +3
Query: 177 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 356
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 357 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 536
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 537 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 662
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 663 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 803
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 168 bits (408), Expect = 2e-41
Identities = 95/227 (41%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Frame = +3
Query: 177 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 356
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 357 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 536
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 537 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 662
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 663 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 803
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
>AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 168 bits (408), Expect = 2e-41
Identities = 95/227 (41%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Frame = +3
Query: 177 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 356
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 357 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 536
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 537 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 662
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 663 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 803
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
>AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 168 bits (408), Expect = 2e-41
Identities = 95/227 (41%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Frame = +3
Query: 177 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 356
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 357 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 536
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 537 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 662
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 663 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 803
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
>AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit protein.
Length = 320
Score = 168 bits (408), Expect = 2e-41
Identities = 95/227 (41%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Frame = +3
Query: 177 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 356
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 357 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 536
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 537 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 662
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 663 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 803
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTG 277
>U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 545 VLKWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 426
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 545 VLKWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 426
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 545 VLKWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 426
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 545 VLKWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 426
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,764,329
Number of Sequences: 237096
Number of extensions: 2125408
Number of successful extensions: 5155
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5147
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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