Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2c09
         (808 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p pro...   219   3e-57
AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA ...   219   3e-57
AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-P...   190   3e-48

>AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p
           protein.
          Length = 269

 Score =  219 bits (536), Expect = 3e-57
 Identities = 116/237 (48%), Positives = 153/237 (64%), Gaps = 7/237 (2%)
 Frame = +3

Query: 114 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 293
           MP  E  ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1   MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60

Query: 294 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 473
           V K++AKR+TW+KFGDS +DKPGPN  TT V+E++ MQF+ SKE+ ++ +D  LD    P
Sbjct: 61  VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKED-EKANDPLLD----P 115

Query: 474 SSNVIFKCRTCQGDHLTLYCPFKHTQI---XXXXXXXXXXXXXXXXXXSNKYIPP----S 632
           + N I KCR C G+H ++ CP+K T +                     S KY+PP    S
Sbjct: 116 TKN-IAKCRICNGEHWSVNCPYKGTAMDTNMMEKKASAAAAAAVDAPKSGKYVPPFLKDS 174

Query: 633 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 803
             G +  R      R+D  AIRISNLS    EAD+++LVK  GP  K+YLA++K+TG
Sbjct: 175 QKGALGMRG-----RDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTG 226


>AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA
           protein.
          Length = 269

 Score =  219 bits (536), Expect = 3e-57
 Identities = 116/237 (48%), Positives = 153/237 (64%), Gaps = 7/237 (2%)
 Frame = +3

Query: 114 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 293
           MP  E  ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1   MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60

Query: 294 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 473
           V K++AKR+TW+KFGDS +DKPGPN  TT V+E++ MQF+ SKE+ ++ +D  LD    P
Sbjct: 61  VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKED-EKANDPLLD----P 115

Query: 474 SSNVIFKCRTCQGDHLTLYCPFKHTQI---XXXXXXXXXXXXXXXXXXSNKYIPP----S 632
           + N I KCR C G+H ++ CP+K T +                     S KY+PP    S
Sbjct: 116 TKN-IAKCRICNGEHWSVNCPYKGTAMDTNMMEKKASAAAAAAVDAPKSGKYVPPFLKDS 174

Query: 633 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 803
             G +  R      R+D  AIRISNLS    EAD+++LVK  GP  K+YLA++K+TG
Sbjct: 175 QKGALGMRG-----RDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTG 226


>AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-PA
           protein.
          Length = 273

 Score =  190 bits (462), Expect = 3e-48
 Identities = 105/234 (44%), Positives = 145/234 (61%), Gaps = 10/234 (4%)
 Frame = +3

Query: 132 FQASWADEVEIDQ-GVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSI 308
           F  SWADEV+ D    LPP +E ++   K VTEYK+++D KKVK+VRT+KIEK++V K++
Sbjct: 4   FVTSWADEVDADYVDGLPPSNEYIKGDFKYVTEYKFNDDGKKVKVVRTFKIEKQIVPKAV 63

Query: 309 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVI 488
           A+R+ W KFGDS SDKPGPN  TT  +E++FMQFI SK+  Q   + +LD    P  N I
Sbjct: 64  ARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGSKDFDQ-THETQLD----PGKN-I 117

Query: 489 FKCRTCQGDHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXXSN-----KYIPP--SSAGRI 647
            KCR C G+H ++ CP+K T +                  S+     KY+PP     G I
Sbjct: 118 AKCRICNGEHWSVNCPYKGTSMDSKTVMETKANAAAAAAISDPSKTGKYVPPFMKDGGGI 177

Query: 648 PG-RDQPPVR-REDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 803
            G ++    R R+D +A+RISNLS    E D+++LVK  GP  K+YLA+EK++G
Sbjct: 178 SGSKNWGRGRDRDDSSAVRISNLSESMTETDLEELVKKIGPHTKMYLAREKNSG 231


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,101,870
Number of Sequences: 53049
Number of extensions: 670774
Number of successful extensions: 2519
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2512
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)