Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2b24
         (766 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111391-1|AAI11392.1|  160|Homo sapiens chromosome 16 open read...    42   0.002
BC001912-1|AAH01912.2|  160|Homo sapiens chromosome 16 open read...    42   0.002
AL022341-1|CAC79467.2|  160|Homo sapiens novel protein protein.        42   0.002
AF386504-1|AAK67346.1|  113|Homo sapiens HTB protein.                  39   0.023

>BC111391-1|AAI11392.1|  160|Homo sapiens chromosome 16 open reading
           frame 14 protein.
          Length = 160

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +3

Query: 423 HDDLINYIYDSWNKVTRDL------ERGDDEAKYYHDVMTPRHLANFRPFNLDEWWARQ 581
           H++ + ++ ++W +V + L      E G    +Y      PR L NF P +LDEWWA+Q
Sbjct: 94  HEENVRFVSEAWQQVQQQLDGGPAGEGGPRPVQYVERTPNPR-LQNFVPIDLDEWWAQQ 151


>BC001912-1|AAH01912.2|  160|Homo sapiens chromosome 16 open reading
           frame 14 protein.
          Length = 160

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +3

Query: 423 HDDLINYIYDSWNKVTRDL------ERGDDEAKYYHDVMTPRHLANFRPFNLDEWWARQ 581
           H++ + ++ ++W +V + L      E G    +Y      PR L NF P +LDEWWA+Q
Sbjct: 94  HEENVRFVSEAWQQVQQQLDGGPAGEGGPRPVQYVERTPNPR-LQNFVPIDLDEWWAQQ 151


>AL022341-1|CAC79467.2|  160|Homo sapiens novel protein protein.
          Length = 160

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +3

Query: 423 HDDLINYIYDSWNKVTRDL------ERGDDEAKYYHDVMTPRHLANFRPFNLDEWWARQ 581
           H++ + ++ ++W +V + L      E G    +Y      PR L NF P +LDEWWA+Q
Sbjct: 94  HEENVRFVSEAWQQVQQQLDGGPAGEGGPRPVQYVERTPNPR-LQNFVPIDLDEWWAQQ 151


>AF386504-1|AAK67346.1|  113|Homo sapiens HTB protein.
          Length = 113

 Score = 38.7 bits (86), Expect = 0.023
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
 Frame = +3

Query: 423 HDDLINYIYDSWNKVTRDL------ERGDDEAKYYHDVMTPRHLANFRPFNLDEWWARQT 584
           H++ + ++ ++W +V + L      E G    +Y      PR L NF P +LDEWW    
Sbjct: 12  HEENVRFVSEAWQQVQQQLDGGPAGEGGPRPVQYVERTPNPR-LQNFVPIDLDEWWGAAV 70

Query: 585 HNRN 596
              N
Sbjct: 71  PGEN 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,528,314
Number of Sequences: 237096
Number of extensions: 1445053
Number of successful extensions: 2275
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2271
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)