Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2b14
         (731 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113261-1|AAM29266.1|  199|Drosophila melanogaster AT15479p pro...    29   4.9  
AE014297-232|AAN13279.1|  199|Drosophila melanogaster CG31542-PA...    29   4.9  
BT011553-1|AAS15689.1|  215|Drosophila melanogaster AT30947p pro...    29   6.5  
AE014298-3057|AAF50877.3|  221|Drosophila melanogaster CG11233-P...    29   6.5  
AY075271-1|AAL68138.2|  480|Drosophila melanogaster AT29464p pro...    29   8.6  
AE014296-1549|AAF50345.1|  476|Drosophila melanogaster CG5653-PA...    29   8.6  

>AY113261-1|AAM29266.1|  199|Drosophila melanogaster AT15479p
           protein.
          Length = 199

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 726 TTPCVCEQIRQKAPPLSKFR*HLQCSNNP 640
           T  C C Q R + PP S    H+ CS  P
Sbjct: 81  TVECTCTQNRSRPPPPSVQADHITCSRGP 109


>AE014297-232|AAN13279.1|  199|Drosophila melanogaster CG31542-PA
           protein.
          Length = 199

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 726 TTPCVCEQIRQKAPPLSKFR*HLQCSNNP 640
           T  C C Q R + PP S    H+ CS  P
Sbjct: 81  TVECTCTQNRSRPPPPSVQADHITCSRGP 109


>BT011553-1|AAS15689.1|  215|Drosophila melanogaster AT30947p
           protein.
          Length = 215

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 461 SVPSTRT-LVPNATRSYFCLQ--QQRLPSKGVTHAHLSTLEQRHANRR 595
           S  ST T L P A  + +CL+  QQR  ++   H H   ++  H NRR
Sbjct: 41  SAISTETSLQPVAAPTMYCLRLAQQRPITERHVHFHAGVIDNEHMNRR 88


>AE014298-3057|AAF50877.3|  221|Drosophila melanogaster CG11233-PA
           protein.
          Length = 221

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 461 SVPSTRT-LVPNATRSYFCLQ--QQRLPSKGVTHAHLSTLEQRHANRR 595
           S  ST T L P A  + +CL+  QQR  ++   H H   ++  H NRR
Sbjct: 41  SAISTETSLQPVAAPTMYCLRLAQQRPITERHVHFHAGVIDNEHMNRR 88


>AY075271-1|AAL68138.2|  480|Drosophila melanogaster AT29464p
           protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 451 DHFICTVYSHSCTERHAQLFLSPAATATV 537
           DH ICTV      E+H +LF+ P   A V
Sbjct: 259 DHVICTVSLGVLQEQHEKLFVPPLPAAKV 287


>AE014296-1549|AAF50345.1|  476|Drosophila melanogaster CG5653-PA
           protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 451 DHFICTVYSHSCTERHAQLFLSPAATATV 537
           DH ICTV      E+H +LF+ P   A V
Sbjct: 255 DHVICTVSLGVLQEQHEKLFVPPLPAAKV 283


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,771,214
Number of Sequences: 53049
Number of extensions: 681945
Number of successful extensions: 2315
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2315
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)