Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2b12
(701 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 29 0.049
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 29 0.049
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 23 2.4
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 4.2
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 5.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 5.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 5.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 5.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 5.6
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 22 5.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 5.6
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 21 7.4
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 7.4
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 9.7
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 28.7 bits (61), Expect = 0.049
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 299 TDNSEYLNQTDVLTDVTDHYESYGNDYQFENSYNQFQSDGE 421
T+N+ V T+ +D+Y S+ Y E+S NQ GE
Sbjct: 458 TNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGE 498
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 28.7 bits (61), Expect = 0.049
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 299 TDNSEYLNQTDVLTDVTDHYESYGNDYQFENSYNQFQSDGE 421
T+N+ V T+ +D+Y S+ Y E+S NQ GE
Sbjct: 406 TNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGE 446
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/43 (18%), Positives = 23/43 (53%)
Frame = +2
Query: 302 DNSEYLNQTDVLTDVTDHYESYGNDYQFENSYNQFQSDGEKYD 430
DN ++L + ++ + + + S +++ + + +D E+YD
Sbjct: 142 DNQDHLRRLEMSLEKSGLFSSKTSEHSVDELSGKSDNDAEEYD 184
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 428 DRGVGDAESSVVPATTDFHHTESSH 502
DRG A +++V T FHH + +
Sbjct: 174 DRGRVAAAAAMVAETASFHHDAAGY 198
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 353 HYESYGNDYQFENSYNQF 406
H YG+ YQF+ +QF
Sbjct: 290 HMSPYGHPYQFDLHPSQF 307
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 353 HYESYGNDYQFENSYNQF 406
H YG+ YQF+ +QF
Sbjct: 290 HMSPYGHPYQFDLHPSQF 307
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 353 HYESYGNDYQFENSYNQF 406
H YG+ YQF+ +QF
Sbjct: 290 HMSPYGHPYQFDLHPSQF 307
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 353 HYESYGNDYQFENSYNQF 406
H YG+ YQF+ +QF
Sbjct: 246 HMSPYGHPYQFDLHPSQF 263
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 353 HYESYGNDYQFENSYNQF 406
H YG+ YQF+ +QF
Sbjct: 290 HMSPYGHPYQFDLHPSQF 307
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 353 HYESYGNDYQFENSYNQF 406
H YG+ YQF+ +QF
Sbjct: 78 HMSPYGHPYQFDLHPSQF 95
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 353 HYESYGNDYQFENSYNQF 406
H YG+ YQF+ +QF
Sbjct: 290 HMSPYGHPYQFDLHPSQF 307
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 507 MSFKLLRILLTKG 545
MSFKLLR++L G
Sbjct: 1 MSFKLLRLVLKVG 13
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 507 MSFKLLRILLTKG 545
MSFKLLR++L G
Sbjct: 1 MSFKLLRLVLKVG 13
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock
protein 90 protein.
Length = 721
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 LIEPIVNNFYLTEEELAREL 85
L+ I+N FY +E REL
Sbjct: 22 LMSLIINTFYSNKEIFLREL 41
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,549
Number of Sequences: 336
Number of extensions: 2426
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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