Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2b12
         (701 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0263 + 28002315-28002634,28003263-28003350,28004296-280043...    40   0.001
12_01_0774 + 7063465-7064011,7065183-7065791,7067905-7068464,706...    28   6.2  

>01_06_0263 +
           28002315-28002634,28003263-28003350,28004296-28004377,
           28004637-28004764
          Length = 205

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 15/33 (45%), Positives = 25/33 (75%)
 Frame = +2

Query: 596 MQVLVSNFTEEQLNRYEMYRRAAFPKAAVXRLM 694
           M  ++S FTE+Q+NRYE +RR+ F K+ + +L+
Sbjct: 106 MNAILSQFTEDQMNRYESFRRSGFQKSNMKKLL 138


>12_01_0774 +
           7063465-7064011,7065183-7065791,7067905-7068464,
           7069411-7069530
          Length = 611

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +2

Query: 416 GEKYDRGVGDAESSVVPATTD-FHHTESSHIYEFQTAEDLIN 538
           GE+ +    D  S   P T D  HH E   +Y+F  A+  IN
Sbjct: 118 GEEEEGQATDGASHSQPQTIDGAHHAEDQTVYDFPIAQVAIN 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,301,973
Number of Sequences: 37544
Number of extensions: 198082
Number of successful extensions: 518
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)