Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2b12
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   3.0  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   4.0  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       24   4.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.3  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   7.0  
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    23   9.3  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   9.3  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +2

Query: 296  YTDNSEYL-NQTDVLTDVTDHYE-SYGN-DYQFENSYNQFQSD 415
            Y D S Y  N T    D   ++   Y N DY F+  +NQFQ D
Sbjct: 1556 YKDVSNYAKNLTYQFFDYARYFTFPYWNEDYFFQGKHNQFQID 1598


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
 Frame = +2

Query: 203 NTNIETEVIDTYAEISQNVETVHKAD------ELGNI-YTDNSEYLNQTDVLTDVTDHYE 361
           N    T    TY E  +NV T +  +      E G+   TD   Y    DV+  V DH  
Sbjct: 375 NDAFPTGAPPTYEEPFRNVATANHPNATCGRPEFGDYCITDFQAYDTDEDVINGVPDHQL 434

Query: 362 SYGNDYQFENSY-NQFQSD 415
           ++G  Y +  S+ + F+S+
Sbjct: 435 TFG-FYNYPVSFESMFESN 452


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -2

Query: 700 CLHKSXYSSFWKGCSSIHLISIQLFFS 620
           C+ +  Y   W+G      +++++FFS
Sbjct: 156 CIGRGRYGEVWRGIWHGESVAVKIFFS 182


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 395  YNQFQSDGEKYDRGVGDAESSVVP 466
            Y     DG    RGVG+AE   VP
Sbjct: 2116 YGAMGEDGPGEGRGVGEAEDVEVP 2139


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 280 ISFVNSFNILRNFCICIYHLSFNICI 203
           I F+NSF +  +    + H+ F +C+
Sbjct: 515 IIFLNSFKMKLSIIFGVVHMIFGVCM 540


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +2

Query: 344 VTDHYESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPATT 475
           + D  + +  D Q+E   ++   D + Y RGV +   +V+   T
Sbjct: 83  IYDDVKGFDVDKQYERVKDRLSVDEDTYKRGVKNCIRNVLRGRT 126


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 289 SKFISFVNSFNILRNFCICIYHLSFNICILI 197
           S  I F+NS+ +  +    + H+ F +C+ +
Sbjct: 523 SNKIIFLNSYKMKLSIIFGVVHMIFGVCMSV 553


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,188
Number of Sequences: 2352
Number of extensions: 9165
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)