Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2b12
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58732-7|AAB00597.1| 345|Caenorhabditis elegans Taf (tbp-associ... 46 2e-05
Z75545-2|CAA99885.1| 327|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 34 0.11
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 34 0.11
Z81456-1|CAB03810.1| 548|Caenorhabditis elegans Hypothetical pr... 33 0.15
AL032635-3|CAB63374.1| 635|Caenorhabditis elegans Hypothetical ... 32 0.35
Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 31 1.1
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 31 1.1
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z35640-3|CAA84701.2| 196|Caenorhabditis elegans Hypothetical pr... 30 1.4
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL032630-7|CAA21563.1| 241|Caenorhabditis elegans Hypothetical ... 29 2.4
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 29 3.2
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 5.6
U39852-5|AAK39258.1| 410|Caenorhabditis elegans Hypothetical pr... 28 5.6
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 28 5.6
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 28 7.4
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 28 7.4
U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z48544-3|CAA88438.2| 239|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U58732-7|AAB00597.1| 345|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 11.1
protein.
Length = 345
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = +2
Query: 599 QVLVSNFTEEQLNRYEMYRRAAFPKAAVXRLM 694
QVL+SNF++EQL RYE YRR++F K+ + RL+
Sbjct: 237 QVLLSNFSQEQLERYESYRRSSFQKSTIRRLI 268
>Z75545-2|CAA99885.1| 327|Caenorhabditis elegans Hypothetical
protein K10D3.3 protein.
Length = 327
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/32 (53%), Positives = 28/32 (87%)
Frame = +2
Query: 599 QVLVSNFTEEQLNRYEMYRRAAFPKAAVXRLM 694
QVLV+NF++EQ+ RYE+YR+++F K+ + RL+
Sbjct: 222 QVLVANFSQEQIERYEVYRKSSFKKSTIKRLI 253
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 362 SYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTESSHIYEFQTAED 529
++G + FENS FQ EK+ R + S +P + H +E S + + E+
Sbjct: 191 AFGTSF-FENSQKSFQESSEKFHRDLASPLSRTIPVQSAGHFSEVSKYFNSEEEEN 245
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 362 SYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTESSHIYEFQTAED 529
++G + FENS FQ EK+ R + S +P + H +E S + + E+
Sbjct: 775 AFGTSF-FENSQKSFQESSEKFHRDLASPLSRTIPVQSAGHFSEVSKYFNSEEEEN 829
>Z81456-1|CAB03810.1| 548|Caenorhabditis elegans Hypothetical
protein B0462.1 protein.
Length = 548
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 239 AEISQNV--ETVHKADELGNIYTDNSEYLNQT-DVLTDVTDHYESYGNDYQFE 388
AE+ N E + DEL N Y S+Y T D++ V D Y+SY N + E
Sbjct: 308 AEVLNNAFDEYNKRMDELHNEYCKKSDYWRHTLDIVYGVQDEYKSYSNQQKAE 360
>AL032635-3|CAB63374.1| 635|Caenorhabditis elegans Hypothetical
protein Y51A2A.5 protein.
Length = 635
Score = 32.3 bits (70), Expect = 0.35
Identities = 29/104 (27%), Positives = 47/104 (45%)
Frame = +2
Query: 194 SDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYESYGN 373
S+ NIET +D E N +T +K + L ++ TD++ +++ DV D
Sbjct: 333 SNVQKNIETVEMDKVEEECINCDTYNK-EVLNDLVTDSNIIISRFPEDEDVKDKRTFEDK 391
Query: 374 DYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTESSHI 505
D E+ D + D +G ++S + DFH ESS I
Sbjct: 392 D---ESISEMDTVDQKAKDVNLGPPQNSNKHCSKDFHSFESSTI 432
>Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical
protein B0284.1 protein.
Length = 431
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 191 ESDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDH 355
E Q T E + +QN E + +A GN DN +NQ +V +TDH
Sbjct: 73 EQSQKTRAEDQARADQIR-TQNEENLKEAVASGNQLLDNQRIVNQAEVTKRLTDH 126
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 413 DGEKYDRGVGDAESSVVPATTDFHHTESSHI 505
+GE R +G +S ++P + DF TE+SH+
Sbjct: 497 NGEPLIRTIGAPKSGILPTSVDFVSTETSHL 527
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 413 DGEKYDRGVGDAESSVVPATTDFHHTESSHI 505
+GE R +G +S ++P + DF TE+SH+
Sbjct: 497 NGEPLIRTIGAPKSGILPTSVDFVSTETSHL 527
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 305 CLYKYFQVHQLCEQFQHFEKFLHMYLSP 222
CL K ++H+ CE+ HF K + Y P
Sbjct: 256 CLIKTMRLHRTCEKLIHFVKCFYTYTEP 283
>Z35640-3|CAA84701.2| 196|Caenorhabditis elegans Hypothetical
protein F43D9.5 protein.
Length = 196
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +2
Query: 602 VLVSNFTEEQLNRYEMYRRAAFPKAAVXRLM 694
+L++NF+ EQL+RY ++R+ F + + ++
Sbjct: 95 LLIANFSNEQLDRYTAFKRSRFNRRIIKNVI 125
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +2
Query: 257 VETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYES---YGNDYQFENSYNQFQSDGEKY 427
++ V +A + TD SEY + + + D +D YE + + ++E+ +++ + E+
Sbjct: 801 LKLVDRAARKDSDETDESEYYDDEEEIEDESDEYEDEEYWDEEIEYEDE-EEYEYEDEEV 859
Query: 428 DRGVGDAESSVVPATTDFHHTESSHIYEFQTAEDL 532
GD E + D ESS + E E L
Sbjct: 860 LEEYGDEEEEDI----DMKSVESSDVEEESVMEVL 890
>Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical
protein F32A11.6 protein.
Length = 367
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Frame = +2
Query: 191 ESDQNTNIETEVIDTYAEIS-----QNVETVHKADELGNIY--TDNSEYLNQTDVLTDVT 349
ES QN +T++ D Y + +H D N Y D ++Q L D+
Sbjct: 166 ESRQNNKYKTKLCDKYTTTGLCPYGKRCLFIHP-DNQPNAYIRADKLYEVSQRHALADLR 224
Query: 350 DHYESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTES 496
DH ES NSYNQ + G + +SS + +++D H S
Sbjct: 225 DHVESQIMTGNTRNSYNQ-----QPPPMGGLEMQSSPMKSSSDSSHMRS 268
>AL032630-7|CAA21563.1| 241|Caenorhabditis elegans Hypothetical
protein Y62H9A.7 protein.
Length = 241
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 170 TTLVNYGESDQNTNIET--EVIDTYAEISQNVETVHKADELGNIY 298
+T +N+G+ ++N+ E E I +AE + ++ H+ N+Y
Sbjct: 89 STAINHGQPEENSRFEMDDETICLFAEALRRCQSFHETPAFANLY 133
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 242 EISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYESYGNDY 379
E SQ ETV A GN Y + N+ TD + YG+ +
Sbjct: 623 ETSQPSETVETAPANGNDYDEEKSVENKVSTETDAVPNLGEYGSKF 668
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 176 LVNYGESDQNTNIETEVIDTYAEISQNVETVHKADELG-NIYTDNSE--YLNQTDVLTDV 346
L+ + + N + E++DT +++ + + V KA+ + D SE YLN+ VL ++
Sbjct: 39 LIGSIKRETNDEVLVELVDTSRQVTISRDDVQKANPPKFDKIEDMSELTYLNEASVLHNL 98
Query: 347 TDHYES 364
D Y S
Sbjct: 99 KDRYYS 104
>U39852-5|AAK39258.1| 410|Caenorhabditis elegans Hypothetical
protein K10C2.3 protein.
Length = 410
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 356 YESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVV 463
Y +YGN Y ++N+ FQ K +GD ++ ++
Sbjct: 139 YYAYGNKYTYKNNLGTFQGFDAKDTVVIGDRKTDLI 174
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 350 QLHQ*EHLFG-SSIQNCLYKYFQVHQLCEQFQHFEKFLHMYLSPQFQYLYSDRF 192
+L+Q LF + + + YKY ++H LC +F KF M Y+ DRF
Sbjct: 137 ELYQGAKLFYMTGMMHGQYKYNEIHNLC-RFISVMKFRPMVWKDAHPYVLCDRF 189
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/93 (23%), Positives = 39/93 (41%)
Frame = +2
Query: 182 NYGESDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYE 361
N + + + I + I+T QN E HK DE+ +++ SE ++ L E
Sbjct: 296 NRNDLESWSQIRVQEINTQTN-RQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLE 354
Query: 362 SYGNDYQFENSYNQFQSDGEKYDRGVGDAESSV 460
Q E+ Q + D Y+ + D ++ V
Sbjct: 355 K-----QLEDLNYQLEDDQRSYEAALNDKDAQV 382
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/93 (23%), Positives = 39/93 (41%)
Frame = +2
Query: 182 NYGESDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYE 361
N + + + I + I+T QN E HK DE+ +++ SE ++ L E
Sbjct: 296 NRNDLESWSQIRVQEINTQTN-RQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLE 354
Query: 362 SYGNDYQFENSYNQFQSDGEKYDRGVGDAESSV 460
Q E+ Q + D Y+ + D ++ V
Sbjct: 355 K-----QLEDLNYQLEDDQRSYEAALNDKDAQV 382
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/93 (23%), Positives = 39/93 (41%)
Frame = +2
Query: 182 NYGESDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYE 361
N + + + I + I+T QN E HK DE+ +++ SE ++ L E
Sbjct: 296 NRNDLESWSQIRVQEINTQTN-RQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLE 354
Query: 362 SYGNDYQFENSYNQFQSDGEKYDRGVGDAESSV 460
Q E+ Q + D Y+ + D ++ V
Sbjct: 355 K-----QLEDLNYQLEDDQRSYEAALNDKDAQV 382
>U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical
protein C30G4.6 protein.
Length = 382
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Frame = -1
Query: 401 GCKNFQ----TDSHFHMTHNGQLHQ*EHLFGS-SIQN 306
GCKN D HF ++ +LH E+++GS +IQN
Sbjct: 124 GCKNLTGNLLIDDHFDFKNSYKLHDVENIYGSITIQN 160
>Z48544-3|CAA88438.2| 239|Caenorhabditis elegans Hypothetical
protein ZK945.4 protein.
Length = 239
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +2
Query: 257 VETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYESYGNDYQFENSYNQFQSDGEKYDRG 436
+E + + ++L IY++ + D+L D Y + +Y + + Y RG
Sbjct: 138 LEIIDRTEDL-TIYSEGLRLIMIVDLLDGDRDRYFVALEQLEEAVAYEKIIVGLKSYSRG 196
Query: 437 VGDAESSVVPATTDFHH 487
G+A S+ + D H+
Sbjct: 197 HGEAASNFLTKLADLHN 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,760,096
Number of Sequences: 27780
Number of extensions: 212166
Number of successful extensions: 715
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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