Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2b11
(364 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55856-3|AAA98022.2| 472|Caenorhabditis elegans Hypothetical pr... 27 4.0
L08403-7|AAA28019.2| 309|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 27 5.3
AF036688-4|AAB88313.1| 233|Caenorhabditis elegans Hypothetical ... 27 5.3
Z81571-7|CAB04620.1| 272|Caenorhabditis elegans Hypothetical pr... 26 7.0
U41273-3|AAA82455.2| 257|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical pr... 26 9.3
Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical pr... 26 9.3
AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase... 26 9.3
AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase... 26 9.3
>U55856-3|AAA98022.2| 472|Caenorhabditis elegans Hypothetical
protein F31E8.5 protein.
Length = 472
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 145 RYWAA---AIVISSPLFYKIHKMSNSPEN 222
+YWA +I L K+H +S SPEN
Sbjct: 139 KYWARNRLEFIIDDQLISKVHVLSKSPEN 167
>L08403-7|AAA28019.2| 309|Caenorhabditis elegans Hypothetical
protein F42H10.9 protein.
Length = 309
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 157 QPSNARATNSGGKIYMGTERPSLRTCKGTSWGDQGRPT 44
QP R N+ + + ++ PS R SW D+ RPT
Sbjct: 193 QPQLRRKANTTNIVDVSSQVPSARNAIYGSWQDRHRPT 230
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 4 VFSIFSSFTYALTMSDAPGRPMKFPY 81
+FS F T A+ M+DA G+P F +
Sbjct: 257 MFSKFGEITSAVVMTDAQGKPKGFGF 282
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 4 VFSIFSSFTYALTMSDAPGRPMKFPY 81
+FS F T A+ M+DA G+P F +
Sbjct: 257 MFSKFGEITSAVVMTDAQGKPKGFGF 282
>AF036688-4|AAB88313.1| 233|Caenorhabditis elegans Hypothetical
protein C24D10.4 protein.
Length = 233
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 46 SDAPGRPMKFPYTFSAKVAQF 108
S+ PG P +FP F A +AQF
Sbjct: 79 SEFPGFPSEFPAGFPADIAQF 99
>Z81571-7|CAB04620.1| 272|Caenorhabditis elegans Hypothetical
protein M01G12.9 protein.
Length = 272
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 115 KFYLQNLWLWRYWAAAIVISSPLFY--KIHKMSNSPENVSKWAEIRRKE 255
K++L+N W YW + + L + K P+ ++K E +R+E
Sbjct: 207 KYHLENSSCWFYWQSVFGNCNTLIVGSRTGKQDQDPKTLTKTRERQREE 255
>U41273-3|AAA82455.2| 257|Caenorhabditis elegans Hypothetical
protein C26B9.3 protein.
Length = 257
Score = 26.2 bits (55), Expect = 7.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 238 QPTCLHFQGSLTFCEFCRRV 179
Q C +GS FC+FC+++
Sbjct: 117 QCPCAKLEGSCVFCDFCKQL 136
>Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical
protein T14G10.5b protein.
Length = 883
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 166 VISSPLFYKIHKMSNSPENVSKWA-EIRRKEAAEHH 270
+ SS + IH M S E V +WA E++ ++++H
Sbjct: 164 ISSSAIVSSIHLMRKSSEVVRRWANEVQEAVSSDNH 199
>Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical
protein T14G10.5a protein.
Length = 870
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 166 VISSPLFYKIHKMSNSPENVSKWA-EIRRKEAAEHH 270
+ SS + IH M S E V +WA E++ ++++H
Sbjct: 151 ISSSAIVSSIHLMRKSSEVVRRWANEVQEAVSSDNH 186
>AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase c
like protein 1,isoform a protein.
Length = 1075
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 334 IAYNINKSNNLLQAVIGTTTFSGVRQLLSF*FQPTCL 224
+ +N+ N+LL G+TT S + L S + TCL
Sbjct: 558 VFFNVKTLNDLLSTAPGSTTMSSRKNLASV-TESTCL 593
>AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase c
like protein 1,isoform b protein.
Length = 1068
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 334 IAYNINKSNNLLQAVIGTTTFSGVRQLLSF*FQPTCL 224
+ +N+ N+LL G+TT S + L S + TCL
Sbjct: 551 VFFNVKTLNDLLSTAPGSTTMSSRKNLASV-TESTCL 586
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,922,715
Number of Sequences: 27780
Number of extensions: 185368
Number of successful extensions: 467
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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