Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2b09
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.49 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.1  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   6.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.0  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 487 LFVSVMSFTIVMGLECLKTKLVDSSLMFNSFMCA-LYIMIATVWSL 621
           LF + +SF     +  L  +L+     F+SFM + L+  +A+ W L
Sbjct: 73  LFCASLSFYKAFKIGILLNQLITPLFFFHSFMTSVLFSQVASRWPL 118



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 477 YGYIVCFSYEFYYCYGFRMFENE 545
           +GY+ C S  FY  +   +  N+
Sbjct: 70  FGYLFCASLSFYKAFKIGILLNQ 92


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 433 TMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKTKLVDSSL-MFNSFMCALYIMIA 606
           T+G     +  K+C +VI+F  ++   ++      K  L D  L  FN+F   L  +++
Sbjct: 29  TVGKCQRLKTDKNCTIVIIFHLILFAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFVVS 87


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 316 STARY*STWLGTASFRKLLHGLLW 245
           S  RY + W GTA+ +  + GLL+
Sbjct: 111 SCTRYWTCWNGTATEQLCIGGLLY 134


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 471 MLYGYIVCFSYEFYYCY 521
           M   YI CF    YY Y
Sbjct: 1   MFLAYIACFLLLLYYIY 17


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 610 VWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 711
           ++SL+  LT  Y   ++     PF     P PF+
Sbjct: 283 IFSLRPGLTHKYTHEIKLHDKTPFLKRPYPVPFA 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,029
Number of Sequences: 336
Number of extensions: 3887
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)