Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2b08
(302 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P11040 Cluster: ECORI-T site protein ETS; n=5; Nucleopo... 171 3e-42
UniRef50_UPI000159708B Cluster: ets; n=1; Antheraea pernyi nucle... 45 4e-04
UniRef50_Q22N09 Cluster: Putative uncharacterized protein; n=1; ... 36 0.13
UniRef50_Q7VQI6 Cluster: Cell division protein FtsQ; n=2; Candid... 34 0.54
UniRef50_Q7RAS7 Cluster: Putative uncharacterized protein PY0642... 34 0.72
UniRef50_UPI00006CB907 Cluster: hypothetical protein TTHERM_0072... 33 0.95
UniRef50_O67491 Cluster: Putative uncharacterized protein; n=1; ... 33 1.3
UniRef50_Q2NP06 Cluster: ORF105 peptide; n=2; Nucleopolyhedrovir... 33 1.7
UniRef50_Q30PE9 Cluster: Transcriptional regulator, MerR family;... 33 1.7
UniRef50_Q8I332 Cluster: Putative uncharacterized protein PFI058... 33 1.7
UniRef50_UPI0000DB7ACE Cluster: PREDICTED: similar to PNUTS CG33... 32 2.2
UniRef50_Q73R17 Cluster: HD domain protein; n=1; Treponema denti... 32 2.2
UniRef50_Q9GZ07 Cluster: DNA-directed RNA polymerase; n=2; Plasm... 32 2.2
UniRef50_Q1RLA6 Cluster: Zinc finger protein; n=1; Ciona intesti... 32 2.2
UniRef50_A7DMF5 Cluster: ABC transporter related precursor; n=1;... 32 2.2
UniRef50_Q17JW4 Cluster: Pnuts protein; n=2; Fungi/Metazoa group... 32 2.9
UniRef50_A0EIN2 Cluster: Chromosome undetermined scaffold_99, wh... 32 2.9
UniRef50_A3M0A2 Cluster: Predicted protein; n=1; Pichia stipitis... 32 2.9
UniRef50_P35749 Cluster: Myosin-11; n=123; Eukaryota|Rep: Myosin... 32 2.9
UniRef50_A7GLT8 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_A4XL02 Cluster: Sensor protein; n=1; Caldicellulosirupt... 31 3.8
UniRef50_A4CLA6 Cluster: Sensor protein; n=1; Robiginitalea bifo... 31 3.8
UniRef50_A3DGH7 Cluster: Viral A-type inclusion protein repeat c... 31 3.8
UniRef50_Q5CTX7 Cluster: HSPC021/HSPC025 family protein; n=2; Cr... 31 3.8
UniRef50_A0DV32 Cluster: Chromosome undetermined scaffold_65, wh... 31 3.8
UniRef50_A4C819 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q5CSJ7 Cluster: RAD50; n=3; Cryptosporidium|Rep: RAD50 ... 31 5.1
UniRef50_Q2TAA8 Cluster: Translin-associated factor X-interactin... 31 5.1
UniRef50_Q3CEE4 Cluster: Alanine racemase, N-terminal; n=4; Clos... 31 6.7
UniRef50_A1ZM40 Cluster: DNA repair protein RecN; n=1; Microscil... 31 6.7
UniRef50_A4S4G9 Cluster: Predicted protein; n=1; Ostreococcus lu... 31 6.7
UniRef50_Q4N0F2 Cluster: Translation initiation factor IF-2, put... 31 6.7
UniRef50_A0CDC1 Cluster: Chromosome undetermined scaffold_17, wh... 31 6.7
UniRef50_A0BGX9 Cluster: Chromosome undetermined scaffold_107, w... 31 6.7
UniRef50_Q8TQF7 Cluster: Type 2 DNA topoisomerase 6 subunit B; n... 31 6.7
UniRef50_Q6LS22 Cluster: Putative uncharacterized protein; n=2; ... 30 8.8
UniRef50_Q489L6 Cluster: Putative site-specific recombinase; n=1... 30 8.8
UniRef50_A4BGP8 Cluster: Methyl-accepting chemotaxis protein; n=... 30 8.8
UniRef50_Q55GY1 Cluster: Putative uncharacterized protein; n=23;... 30 8.8
UniRef50_A0BM13 Cluster: Chromosome undetermined scaffold_115, w... 30 8.8
UniRef50_Q6FPI3 Cluster: Similar to sp|P25364 Saccharomyces cere... 30 8.8
UniRef50_Q6FK79 Cluster: Similar to sp|P47166 Saccharomyces cere... 30 8.8
UniRef50_Q1WMU0 Cluster: Putative uncharacterized protein UP1; n... 30 8.8
>UniRef50_P11040 Cluster: ECORI-T site protein ETS; n=5;
Nucleopolyhedrovirus|Rep: ECORI-T site protein ETS -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 88
Score = 171 bits (415), Expect = 3e-42
Identities = 80/87 (91%), Positives = 86/87 (98%)
Frame = +2
Query: 20 MIERTVTRWHLLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVK 199
M+ERTVTRWHL+SDNVL KIGEVAQRL+YYLQEYANLEMQIEEEIKYME+DDGEEIDT+K
Sbjct: 1 MMERTVTRWHLVSDNVLFKIGEVAQRLDYYLQEYANLEMQIEEEIKYMEVDDGEEIDTIK 60
Query: 200 TFLRNSMSTAEQRDLYALALKLNSLIN 280
TFLRNSMST+EQRDLYALALKLNSLIN
Sbjct: 61 TFLRNSMSTSEQRDLYALALKLNSLIN 87
>UniRef50_UPI000159708B Cluster: ets; n=1; Antheraea pernyi
nucleopolyhedrovirus|Rep: ets - Antheraea pernyi
nucleopolyhedrovirus
Length = 89
Score = 44.8 bits (101), Expect = 4e-04
Identities = 26/78 (33%), Positives = 44/78 (56%)
Frame = +2
Query: 44 WHLLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMS 223
W L D+ L KI A+ L L E+A + +I EI+ M + D + +++ FL S
Sbjct: 3 WQQLPDDELHKICGAARNLTARLAEHARVHERITAEIRSMGVRDSD--GSIREFLYRSEC 60
Query: 224 TAEQRDLYALALKLNSLI 277
A QR+ +ALA++++ L+
Sbjct: 61 GAAQREAHALAVRIDRLL 78
>UniRef50_Q22N09 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 560
Score = 36.3 bits (80), Expect = 0.13
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Frame = +2
Query: 68 LLKIGEVAQRLNYYLQEYANL-----EMQ-----IEEEIKYMEIDDGEEIDTVKTFLRNS 217
++++ E + L+ Y+QEY NL E+Q I ++K M ++ E +DT+ T R +
Sbjct: 397 IIRLEESKKILHQYIQEYQNLAAEEQELQKSTTKIRSDVKIMNEEEPEILDTLNTLSRRN 456
Query: 218 MSTAEQRDLYALALKLNSL--INNI*YKKK 301
S Q ++ L + +N L IN+I Y +K
Sbjct: 457 NSEILQLKIFKLKM-INHLKEINSIFYNQK 485
>UniRef50_Q7VQI6 Cluster: Cell division protein FtsQ; n=2;
Candidatus Blochmannia|Rep: Cell division protein FtsQ -
Blochmannia floridanus
Length = 276
Score = 34.3 bits (75), Expect = 0.54
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +2
Query: 32 TVTRWHLLSDN-VLLKIG--EVAQRLNYYLQEYANLEMQIEEEIKYMEIDD 175
T W L+ DN V LK+G + +RL+Y+++ Y L +++E+ KY++ D
Sbjct: 192 TCYTWQLVLDNNVCLKLGCVNLIERLHYFIKVYPFLVKEMDEKNKYIDYVD 242
>UniRef50_Q7RAS7 Cluster: Putative uncharacterized protein PY06422;
n=13; Eukaryota|Rep: Putative uncharacterized protein
PY06422 - Plasmodium yoelii yoelii
Length = 2649
Score = 33.9 bits (74), Expect = 0.72
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 20 MIERTVTRWHLLSDNVLLKIGEVAQRLNYYLQE-YANLEMQIEEEIKYMEIDDGEEIDTV 196
M E+ +++L DN L KI E N + Y NL ++ E KY+ +++ EID++
Sbjct: 1532 MTEKNQDDYNILEDNNL-KINETNSMFNNRKENIYTNL---LKNENKYVNVNNIFEIDSI 1587
Query: 197 KTFLRNSMSTAEQRDLY 247
+ L+N S A + +
Sbjct: 1588 RANLQNMFSNANGNESF 1604
>UniRef50_UPI00006CB907 Cluster: hypothetical protein
TTHERM_00729180; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00729180 - Tetrahymena
thermophila SB210
Length = 708
Score = 33.5 bits (73), Expect = 0.95
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +2
Query: 101 NYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLYALALKLNSLIN 280
N+Y QE ++ MQIE K + EE+D L N + +D Y KL + IN
Sbjct: 340 NFYSQELGSINMQIEHNQKAQFVSLKEEVD-----LLNKKISKNTKDSYQEIQKLENAIN 394
Query: 281 NI 286
+I
Sbjct: 395 DI 396
>UniRef50_O67491 Cluster: Putative uncharacterized protein; n=1;
Aquifex aeolicus|Rep: Putative uncharacterized protein -
Aquifex aeolicus
Length = 300
Score = 33.1 bits (72), Expect = 1.3
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +2
Query: 23 IERTVTRWHLLSDNVLLKIGEV-AQRLNYYLQEYANLEMQIEEEIKYM-EIDDGEEIDTV 196
+E R L N K+GE+ ++LN L+EY NL +++E+ +K + + + + +T+
Sbjct: 196 LENISLRVEKLVANADKKLGELEVKKLNEVLEEYKNLAVEVEKFVKNLSNLSEKVDRETL 255
Query: 197 KTF--LRNSM-STAEQRDLYALALKLN 268
+ F L NS+ T+E+ LK N
Sbjct: 256 RKFEELINSLEKTSEEVQKLVRKLKNN 282
>UniRef50_Q2NP06 Cluster: ORF105 peptide; n=2;
Nucleopolyhedrovirus|Rep: ORF105 peptide - Hyphantria
cunea nuclear polyhedrosis virus (HcNPV)
Length = 80
Score = 32.7 bits (71), Expect = 1.7
Identities = 24/81 (29%), Positives = 43/81 (53%)
Frame = +2
Query: 41 RWHLLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSM 220
R +LS+ L ++G A +L+ L A ++ ++ E K M + D ++ FL S
Sbjct: 4 RREVLSEQ-LQELGVAAHQLDAQL---AAVQTRVAAEFKCMGVSDKN--GNIREFLYRSE 57
Query: 221 STAEQRDLYALALKLNSLINN 283
QR+ LALK+++++NN
Sbjct: 58 CEDAQRNARVLALKIDAILNN 78
>UniRef50_Q30PE9 Cluster: Transcriptional regulator, MerR family;
n=1; Thiomicrospira denitrificans ATCC 33889|Rep:
Transcriptional regulator, MerR family - Thiomicrospira
denitrificans (strain ATCC 33889 / DSM 1351)
Length = 226
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +2
Query: 89 AQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMST 226
A++L + Y+++ ++I E I+YM+ + G + +KT L+N S+
Sbjct: 31 AKKLKSNVHRYSDIHVEILEYIRYMKQEMGSSNEELKTMLKNKNSS 76
>UniRef50_Q8I332 Cluster: Putative uncharacterized protein PFI0585c;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFI0585c - Plasmodium falciparum (isolate 3D7)
Length = 1568
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 50 LLSDNVLLKIGEVAQRLNYYLQEYA--NLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMS 223
L +DN+ K+ NYY Q+YA NL + K + D ++ +T+K ++ N++S
Sbjct: 693 LTNDNIKKKLKNDENYKNYYFQKYAAFNLTESLTPINKLLHKDFEDDCNTLKQYIINNLS 752
Query: 224 TAEQRD 241
+D
Sbjct: 753 RHMAQD 758
>UniRef50_UPI0000DB7ACE Cluster: PREDICTED: similar to PNUTS
CG33526-PD, isoform D; n=1; Apis mellifera|Rep:
PREDICTED: similar to PNUTS CG33526-PD, isoform D - Apis
mellifera
Length = 1257
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 146 EEIKYMEIDDGEEIDTVKTFL-RNSMSTAEQRDLYALALKLNS 271
E ++Y E+D+ E ++ KTF M +R+ + +A KL++
Sbjct: 886 ESVRYFELDETERVNVTKTFTDMKQMEKQNEREAFQMARKLSN 928
>UniRef50_Q73R17 Cluster: HD domain protein; n=1; Treponema
denticola|Rep: HD domain protein - Treponema denticola
Length = 208
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 110 LQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNS 217
L+EYA+ E+ IE+ I + I D EID TFL +S
Sbjct: 64 LKEYADFEVNIEKVISMLLIHDIVEIDAGDTFLYSS 99
>UniRef50_Q9GZ07 Cluster: DNA-directed RNA polymerase; n=2; Plasmodium
falciparum|Rep: DNA-directed RNA polymerase - Plasmodium
falciparum
Length = 1503
Score = 32.3 bits (70), Expect = 2.2
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 71 LKIGEVAQRLNYYLQEYANLEMQIEEEI-KYMEIDDGEEIDTVKTFLRNSMSTAEQRDLY 247
+ IG++ NY L +Y NL+ Q EEI KY+ + EEI+ + L + T Q+
Sbjct: 960 ITIGKIPLYKNYTLPKYINLKEQNNEEIKKYLLLK--EEINRLNKCLISERPTFLQKLAV 1017
Query: 248 ALALKLNSLI 277
A K N +I
Sbjct: 1018 AKTFKDNDII 1027
>UniRef50_Q1RLA6 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 1243
Score = 32.3 bits (70), Expect = 2.2
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 11 SARMIERTVTRWHLLSDNVLLK--IGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEE 184
S ++ E L+D + LK I E+ ++ ++ NL +QI+E K ++ DDGE
Sbjct: 920 SLKVTELETNTQSQLNDIISLKEKITELLFDKDHLWKDSQNLRLQIDELEKSVDHDDGET 979
Query: 185 IDTV 196
+DTV
Sbjct: 980 LDTV 983
>UniRef50_A7DMF5 Cluster: ABC transporter related precursor; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: ABC
transporter related precursor - Candidatus
Nitrosopumilus maritimus SCM1
Length = 276
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +2
Query: 116 EYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLYA 250
EYAN I+E K +EI G E DT+ F MST E ++YA
Sbjct: 229 EYANRVAVIKEGQKILEI--GVEGDTIVDFQTGDMSTEEIMEMYA 271
>UniRef50_Q17JW4 Cluster: Pnuts protein; n=2; Fungi/Metazoa
group|Rep: Pnuts protein - Aedes aegypti (Yellowfever
mosquito)
Length = 1190
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 146 EEIKYMEIDDGEEIDTVKTFL-RNSMSTAEQRDLYALALKLN 268
EE++Y E+D E + +TF M ++R+ Y LA K+N
Sbjct: 843 EEVRYFELDVTERCNVTRTFTDLKHMERVDERNKYMLARKVN 884
>UniRef50_A0EIN2 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 310
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 89 AQRLNYYLQEYANLEMQIEEEIKYMEIDDGEE 184
A LNYYLQ+ L++++E+E+K ++I E+
Sbjct: 32 AVALNYYLQQKKKLDIELEKEMKKLQIQFDEK 63
>UniRef50_A3M0A2 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 889
Score = 31.9 bits (69), Expect = 2.9
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +2
Query: 110 LQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLYALA----LKLNSLI 277
LQE A L Q+E+EI + D DT K LRN A L + L +N I
Sbjct: 168 LQEEAELNKQLEKEISALPPDSIRSEDTQKIMLRNKQLEAALLSLQTITDSNELNMNKEI 227
Query: 278 NNI 286
N +
Sbjct: 228 NQL 230
>UniRef50_P35749 Cluster: Myosin-11; n=123; Eukaryota|Rep: Myosin-11 -
Homo sapiens (Human)
Length = 1972
Score = 31.9 bits (69), Expect = 2.9
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 59 DNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSM-STAEQ 235
+N L KI E+ ++ LQE + E + + + D GEE++ +KT L +++ STA Q
Sbjct: 1107 NNALKKIRELEGHISD-LQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQ 1165
Query: 236 RDLYA 250
++L A
Sbjct: 1166 QELRA 1170
>UniRef50_A7GLT8 Cluster: Putative uncharacterized protein; n=1;
Bacillus cereus subsp. cytotoxis NVH 391-98|Rep:
Putative uncharacterized protein - Bacillus cereus
subsp. cytotoxis NVH 391-98
Length = 382
Score = 31.5 bits (68), Expect = 3.8
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +2
Query: 11 SARMIERTVTRWHLLSDNVLL--KIGEVAQRLNYYLQEYANLEMQIEEEIKY-MEIDDGE 181
SA +IE T+ +++L + V+L K +V + L E+ L+ Q E + ++I DGE
Sbjct: 283 SANIIEETL-KFNLEDNEVVLVVKSKDVEETLELLSNEHVQLKAQPRESVVIQIKIKDGE 341
Query: 182 EIDTVKT 202
+ D +KT
Sbjct: 342 QQDKIKT 348
>UniRef50_A4XL02 Cluster: Sensor protein; n=1; Caldicellulosiruptor
saccharolyticus DSM 8903|Rep: Sensor protein -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 467
Score = 31.5 bits (68), Expect = 3.8
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Frame = +2
Query: 74 KIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTA---EQRDL 244
+IGE+ NY ++ NLEM + I + + + +++ F+ + E+RD
Sbjct: 225 EIGELIASFNYMTEKLENLEMMRKSFISNVSHELRSPLTSIRGFIEGILDRTIPDEKRDF 284
Query: 245 Y-----ALALKLNSLINNI 286
Y +KLN+LIN +
Sbjct: 285 YLNLVREEVIKLNNLINQL 303
>UniRef50_A4CLA6 Cluster: Sensor protein; n=1; Robiginitalea
biformata HTCC2501|Rep: Sensor protein - Robiginitalea
biformata HTCC2501
Length = 576
Score = 31.5 bits (68), Expect = 3.8
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 77 IGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDG 178
+GE+ QR + +++ LE Q+E E++ ++ D G
Sbjct: 541 LGEIGQRFDELAEDFPRLEAQLEREVEKLKKDQG 574
>UniRef50_A3DGH7 Cluster: Viral A-type inclusion protein repeat
containing protein precursor; n=2; Clostridium
thermocellum ATCC 27405|Rep: Viral A-type inclusion
protein repeat containing protein precursor -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 1102
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 74 KIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEID 190
K+ E+ + ++ Y E +L+ QIEE+ K E D+ E+D
Sbjct: 254 KLEEIEEEIDGYKNEIKDLKKQIEEKKKEAEDDESGEVD 292
>UniRef50_Q5CTX7 Cluster: HSPC021/HSPC025 family protein; n=2;
Cryptosporidium|Rep: HSPC021/HSPC025 family protein -
Cryptosporidium parvum Iowa II
Length = 673
Score = 31.5 bits (68), Expect = 3.8
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +2
Query: 56 SDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQ 235
S N LL+IG + + + AN+E Q++ + Y + D V++FL N + +
Sbjct: 28 SRNALLEIGINEEEEETPMSQNANIESQLQTQQSYNS--ETSFPDEVQSFLINLNDSISR 85
Query: 236 RDLYALALKLNSLINNI*YK 295
RD+ + +L NN+ +K
Sbjct: 86 RDVDRIRYFNENLHNNLTFK 105
>UniRef50_A0DV32 Cluster: Chromosome undetermined scaffold_65, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_65,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 454
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +2
Query: 59 DNVLLKIGEVAQRLNYYLQEYANLEMQIEE-EIK 157
D+ L+++ E Q++NYY + NLE++++E E+K
Sbjct: 197 DSKLIELHEAKQQVNYYKNQCINLEVKVKETEVK 230
>UniRef50_A4C819 Cluster: Putative uncharacterized protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Putative
uncharacterized protein - Pseudoalteromonas tunicata D2
Length = 170
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 92 QRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRN--SMSTAEQRDLYALALKL 265
++L QE AN+ Q+E IK + + + EID + +R + S + L+ +L
Sbjct: 36 EKLTSSFQELANICPQLETTIKQLNLTEHIEIDALHEKMRQQVNQSIVAFQFYDRLSQQL 95
Query: 266 NSLINNI 286
N +INN+
Sbjct: 96 NHVINNL 102
>UniRef50_Q5CSJ7 Cluster: RAD50; n=3; Cryptosporidium|Rep: RAD50 -
Cryptosporidium parvum Iowa II
Length = 1062
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2
Query: 68 LLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQ 235
+L I E QRL + +QE N EIK +EI+ + K FL+NS+ EQ
Sbjct: 639 ILIIDENIQRLEFEIQEVTNKIQFANLEIKNLEIEHCKR----KDFLKNSIEELEQ 690
>UniRef50_Q2TAA8 Cluster: Translin-associated factor X-interacting
protein 1; n=24; Mammalia|Rep: Translin-associated
factor X-interacting protein 1 - Homo sapiens (Human)
Length = 658
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/77 (23%), Positives = 39/77 (50%)
Frame = +2
Query: 17 RMIERTVTRWHLLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTV 196
+M + +TR + +N+ G+V R ++ +QE N ++Q E++ + E
Sbjct: 232 KMTRQDLTRTQMELNNMKANFGDVVPRRDFEMQEKTNKDLQ--EQLDTLRASYEEVRKEH 289
Query: 197 KTFLRNSMSTAEQRDLY 247
+ ++ MST ++RD +
Sbjct: 290 EILMQLHMSTLKERDQF 306
>UniRef50_Q3CEE4 Cluster: Alanine racemase, N-terminal; n=4;
Clostridia|Rep: Alanine racemase, N-terminal -
Thermoanaerobacter ethanolicus ATCC 33223
Length = 354
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 128 LEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLYALALKLN 268
++ ++EE IKY +I EIDT+K+ S +QR ++ + L ++
Sbjct: 80 MKSEVEEVIKYADISLNSEIDTIKSL---SEEAKKQRKIHEIILMVD 123
>UniRef50_A1ZM40 Cluster: DNA repair protein RecN; n=1; Microscilla
marina ATCC 23134|Rep: DNA repair protein RecN -
Microscilla marina ATCC 23134
Length = 552
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +2
Query: 74 KIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVK 199
K+GE+ +R+N L E +L +IE E + +++++ E I+ VK
Sbjct: 261 KLGEIHERMNSALIELEDLNNEIEREEEVVDLNE-ERIEEVK 301
>UniRef50_A4S4G9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 800
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 77 IGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNS 217
I + Q LN + +EYA+L + E ++++E EE+D + + +S
Sbjct: 437 IERMEQALNKFGEEYASLATKASERVRFVESKAIEEMDRLNEHMESS 483
>UniRef50_Q4N0F2 Cluster: Translation initiation factor IF-2,
putative; n=3; Theileria|Rep: Translation initiation
factor IF-2, putative - Theileria parva
Length = 956
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 116 EYANLEMQIEEEIKYMEIDDGEE--IDTVKTFLRNSMSTAEQRDLYALALKLNSLINNI 286
++ + + ++ E K +E + E +D +K FL+ + ++E L L +K+ +L NN+
Sbjct: 134 DHKSKPLDVDFEFKLLEFEGFSEEYLDNIKRFLKILLVSSENSLLNELEIKIRNLYNNL 192
>UniRef50_A0CDC1 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 488
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +2
Query: 98 LNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLYALALKLNSL 274
LN YL+ Y N++ +IE+++ ++ + EI + +R E + +A+ LKL+ L
Sbjct: 368 LNEYLRFYQNIKQKIEQKLTFVNM--VYEISRIYILIRADKLQHEIKKCHAVGLKLDHL 424
>UniRef50_A0BGX9 Cluster: Chromosome undetermined scaffold_107,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_107,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 425
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +2
Query: 50 LLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTA 229
L + ++ KIG+ + +L ++ +Y N MQIEE E D +E++ + R + A
Sbjct: 237 LAKETIMKKIGQ-SDKLKHFAIKYENKYMQIEE----TEEDIEKELEELNVLERKNSMEA 291
Query: 230 EQRDLYALALKLNSLI 277
+ L + ++NS I
Sbjct: 292 PGQFLKHYSARINSFI 307
>UniRef50_Q8TQF7 Cluster: Type 2 DNA topoisomerase 6 subunit B; n=6;
Euryarchaeota|Rep: Type 2 DNA topoisomerase 6 subunit B
- Methanosarcina acetivorans
Length = 621
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +2
Query: 50 LLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEI 154
++ + V L + EVA++L +YL + +NL+ + E+EI
Sbjct: 443 VIKEEVDLAVKEVARKLKHYLSKQSNLKKRREKEI 477
>UniRef50_Q6LS22 Cluster: Putative uncharacterized protein; n=2;
Photobacterium profundum|Rep: Putative uncharacterized
protein - Photobacterium profundum (Photobacterium sp.
(strain SS9))
Length = 185
Score = 30.3 bits (65), Expect = 8.8
Identities = 10/51 (19%), Positives = 28/51 (54%)
Frame = +2
Query: 89 AQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRD 241
A+ +NY + + +I+++++ D + + +K+F + + A+QR+
Sbjct: 89 AKEVNYQPEAFLKTAQEIQQQVRDENTTDEQRAELIKSFAKEKQALAKQRE 139
>UniRef50_Q489L6 Cluster: Putative site-specific recombinase; n=1;
Colwellia psychrerythraea 34H|Rep: Putative
site-specific recombinase - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 681
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 50 LLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEID 190
L+S+ L +GE++Q+ N ANL ++ KYME DD + D
Sbjct: 423 LISNIQLPSVGEISQQQNIIDIVEANLNKISKQFHKYMEFDDDNDPD 469
>UniRef50_A4BGP8 Cluster: Methyl-accepting chemotaxis protein; n=1;
Reinekea sp. MED297|Rep: Methyl-accepting chemotaxis
protein - Reinekea sp. MED297
Length = 669
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 47 HLLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEE 151
HLL D+ +I ++ + LN ++QE + MQI+E+
Sbjct: 358 HLLEDDAHDEISQIVRALNAHVQEISRSLMQIQEQ 392
>UniRef50_Q55GY1 Cluster: Putative uncharacterized protein; n=23;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 813
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 86 VAQR-LNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRD-LYALAL 259
VAQR LNY +Y N +K +I D + ++ F + E R LY L +
Sbjct: 475 VAQRCLNYIFDKYKNKIANFLNNLKNAKIIDNKPKPSISLFANKTRKGRENRSILYYLLI 534
Query: 260 KLNSLINN 283
+ + I+N
Sbjct: 535 SIKNQISN 542
>UniRef50_A0BM13 Cluster: Chromosome undetermined scaffold_115,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_115,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 398
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Frame = +2
Query: 5 LKSARMIERTVTRWHLLSDNVL-LK------IGEVAQRLNYYLQEYANLEMQIEEEIKYM 163
LK+ + ++ + S+N+L LK + E+ + ++ N++ QIEE IK++
Sbjct: 66 LKTQNLTKQNIEVLKQFSENILALKNLLATTLDEINSTIENEIKRLQNVQKQIEENIKFI 125
Query: 164 EIDDGEEIDTVKTFLRNSMST 226
+I + ++I+ + L S+
Sbjct: 126 DIYNFDKIEEAQKLLEQQFSS 146
>UniRef50_Q6FPI3 Cluster: Similar to sp|P25364 Saccharomyces
cerevisiae YCR065w HCM1 transcription factor; n=1;
Candida glabrata|Rep: Similar to sp|P25364 Saccharomyces
cerevisiae YCR065w HCM1 transcription factor - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 548
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 71 LKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDG--EEIDTVKTFLRNSMSTAEQRD 241
+K+G ++ +Y NL Q++ KY +ID EE D K N ST E+++
Sbjct: 186 VKVGSESKFFKGDYGDYENLRKQVQTIEKYFDIDPAMLEEFDNEKPTYLNRESTNEKKN 244
>UniRef50_Q6FK79 Cluster: Similar to sp|P47166 Saccharomyces
cerevisiae YJR134c SGM1; n=1; Candida glabrata|Rep:
Similar to sp|P47166 Saccharomyces cerevisiae YJR134c
SGM1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 611
Score = 30.3 bits (65), Expect = 8.8
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 56 SDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQ 235
+DN+ K+ E Q ++ Q+Y+ E +EE K D + +++ LR S+ E+
Sbjct: 145 NDNLSKKLNESNQEISNLQQKYSLSEKMLEESTK--NSHDVQVLESSNKQLRQSIIDKEK 202
Query: 236 --RDLYALALKLNSLI 277
+DLYA KL I
Sbjct: 203 TIQDLYAKIEKLEDEI 218
>UniRef50_Q1WMU0 Cluster: Putative uncharacterized protein UP1; n=7;
Dikarya|Rep: Putative uncharacterized protein UP1 -
Coprinellus disseminatus
Length = 386
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 44 WHLLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEI 187
WHL SD +L I E+ R +EY M + E Y + G ++
Sbjct: 327 WHLSSDEMLTPIPELLARAQAIREEYLKAGMDDDNEPVYTPMKVGTQV 374
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 267,095,226
Number of Sequences: 1657284
Number of extensions: 4345249
Number of successful extensions: 15223
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 14846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15218
length of database: 575,637,011
effective HSP length: 77
effective length of database: 448,026,143
effective search space used: 10304601289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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