Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2b08
         (302 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   1.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   1.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   1.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   2.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   3.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   5.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    19   8.7  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = +2

Query: 17  RMIERTVTRWHLLSDNVLLKIGEVAQRLNYYLQE-YANLEMQIEEEIKYMEIDDGEEIDT 193
           R  ++ +   H  S+NV+ +  +     +Y  ++  A L++ ++ + +   IDD    + 
Sbjct: 232 RKEQKVLKSLHSFSNNVIAERKKHFSSSSYSSRKRLAMLDLLLKYKSEGANIDDEGIREE 291

Query: 194 VKTFLRNSMSTAEQRDLYALALKLN 268
           V TF+     T      Y L L  N
Sbjct: 292 VDTFMFEGHDTTSVSICYTLMLLAN 316


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = +2

Query: 17  RMIERTVTRWHLLSDNVLLKIGEVAQRLNYYLQE-YANLEMQIEEEIKYMEIDDGEEIDT 193
           R  ++ +   H  S+NV+ +  +     +Y  ++  A L++ ++ + +   IDD    + 
Sbjct: 232 RKEQKVLKSLHSFSNNVIAERKKHFSSSSYSSRKRLAMLDLLLKYKSEGANIDDEGIREE 291

Query: 194 VKTFLRNSMSTAEQRDLYALALKLN 268
           V TF+     T      Y L L  N
Sbjct: 292 VDTFMFEGHDTTSVSICYTLMLLAN 316


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -1

Query: 230 PPWTWNCAKKS*QCRFLR 177
           P WTW C  +  + R ++
Sbjct: 54  PQWTWQCINQRCERRHIK 71


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 53  LSDNVLLKIGEVAQRLN 103
           L D V LKIGE+   +N
Sbjct: 287 LCDKVQLKIGEIKYSVN 303


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 138 KLRKKLNIWKLMTAKKSTLSRLFCA 212
           KL      WK++    ++   LFCA
Sbjct: 52  KLHFTFKSWKVLYTSLTSFGYLFCA 76


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 185 IDTVKTFLRNSMST 226
           + TVKT L+ +MST
Sbjct: 388 LHTVKTVLKTTMST 401


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 302 FFFYIKYYLLNCLILM 255
           FF+ +  YL+  +ILM
Sbjct: 161 FFYQLLLYLITDMILM 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,064
Number of Sequences: 336
Number of extensions: 1263
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)