Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2b02
         (586 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    26   0.78 
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   3.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.2  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    24   4.2  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   7.3  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   9.6  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   9.6  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 26.2 bits (55), Expect = 0.78
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
 Frame = +1

Query: 442 YNTVRNVLI----LIKNARLVLSNSVKKQYYDD--VLNLKKNTDLES--YDPLKKK 585
           YN   N LI    L+KNA +V+  S  +Q+Y+   +L L K  +L++   D L KK
Sbjct: 12  YNASNNELIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKKRELKAGEEDVLSKK 67


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 312 IIINFFQVAKPQKRFIFGMIVFVLSNAFGRF 220
           I +  +    P+K  +   +  +LSN FGR+
Sbjct: 242 IFVEVYYAESPRKEILPHEVGLILSNRFGRY 272


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +2

Query: 164  IIAH*LCLNVFVKCRLFR-----MKRPNAFDKTNTIMPKMNLFWGFATWKKLIIINV*K 325
            +I + + LN+F+   L       +  P A ++TN I    N    F+ W K+ + N  K
Sbjct: 1015 VIGNLVVLNLFLALLLSNFGSSSLSAPTADNETNKIAEAFNRISRFSNWIKMNLANALK 1073


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 256 DSVRFVECVWPFHPKQPTFH 197
           +S RF  C WP H   P  H
Sbjct: 574 ESFRFCNCGWPDHMLLPKGH 593


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 469 KSTRYAPCCNGAFRRYCYTV 410
           ++TRY PCC   +    Y V
Sbjct: 218 RNTRYYPCCTEPYIDITYNV 237


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 27  RS*IAPKSIRSLLFVAQS 80
           RS +APK ++ +LF+ Q+
Sbjct: 585 RSRLAPKKLQEILFIQQN 602


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
 Frame = +1

Query: 331 YVLDQNFDNDFILTVYRMANVVTKQVRPYNSIDEK----HHYNTVRNVLILIKNARLVLS 498
           ++LD++    F L   R+ NV    +R +NS          +  +  VL+  K A L+L 
Sbjct: 258 FLLDEHHPQLFDLLFDRIVNVSQANMRKFNSWQMMGALCRVHRPMSKVLLFRKTANLLLD 317

Query: 499 N---SVKKQYYDDVL 534
           +     + +YY  +L
Sbjct: 318 HFKWEKENEYYAPML 332


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,522
Number of Sequences: 2352
Number of extensions: 13191
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)