Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2b02
         (586 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M14162-1|AAB04636.1| 4563|Homo sapiens APOB protein.                   31   3.0  
BC036053-1|AAH36053.1|  955|Homo sapiens KIAA1505 protein protein.     30   5.2  
AK056542-1|BAB71211.1|  450|Homo sapiens protein ( Homo sapiens ...    30   5.2  

>M14162-1|AAB04636.1| 4563|Homo sapiens APOB protein.
          Length = 4563

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
 Frame = +1

Query: 232  RIRQNEHYHAKNESFLGFCN-LEEIDYYQCLKMQYVLDQNFDNDFILTVYRMANVVTKQV 408
            RI +N+   A +++ + F   L ++  Y     QY+ D    +D  + +   AN++ + +
Sbjct: 2150 RITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAI---ANIIDEII 2206

Query: 409  RPYNSIDEKHHYNTVRNVLILIKNARLVLSN 501
                S+DE  HY+T  N++  I +  L + N
Sbjct: 2207 EKLKSLDE--HYHTRVNLVKTIHDLHLFIEN 2235


>BC036053-1|AAH36053.1|  955|Homo sapiens KIAA1505 protein protein.
          Length = 955

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = +1

Query: 313 QCLKMQYVLDQ--NFDNDFILTVYRMANVVTKQVRPYNSIDEKHHYNTVRNVLILIKNAR 486
           Q  + Q+ L Q  NF   F   V +M   + K    YN++ E+  +N  R  L  +K  +
Sbjct: 98  QIQQQQFHLQQADNFPEAFSTEVSKMREQLLKYQNEYNAVKEREFHNQYR--LNSLKEEK 155

Query: 487 LVLSNSVKKQYYDDVLNLKKNTDLESYDPLKKK 585
           +++    +K      +  K     ES + L+K+
Sbjct: 156 IIIVKEFEKITKPGEMEKKMKILRESTEELRKE 188


>AK056542-1|BAB71211.1|  450|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31980 fis, clone NT2RP7008487, weakly similar to
           TRICHOHYALIN. ).
          Length = 450

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = +1

Query: 313 QCLKMQYVLDQ--NFDNDFILTVYRMANVVTKQVRPYNSIDEKHHYNTVRNVLILIKNAR 486
           Q  + Q+ L Q  NF   F   V +M   + K    YN++ E+  +N  R  L  +K  +
Sbjct: 43  QIQQQQFHLQQADNFPEAFSTEVSKMREQLLKYQNEYNAVKEREFHNQYR--LNSLKEEK 100

Query: 487 LVLSNSVKKQYYDDVLNLKKNTDLESYDPLKKK 585
           +++    +K      +  K     ES + L+K+
Sbjct: 101 IIIVKEFEKITKPGEMEKKMKILRESTEELRKE 133


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,596,513
Number of Sequences: 237096
Number of extensions: 1593847
Number of successful extensions: 2721
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2721
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)