Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2b01
         (427 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069538-1|AAL39683.1|  562|Drosophila melanogaster LD26135p pro...    29   3.4  
AE014298-875|AAF46151.1|  562|Drosophila melanogaster CG12219-PA...    29   3.4  
AY051428-1|AAK92852.1|  405|Drosophila melanogaster GH10454p pro...    28   6.0  
AE014297-3784|AAF56456.2|  405|Drosophila melanogaster CG10562-P...    28   6.0  

>AY069538-1|AAL39683.1|  562|Drosophila melanogaster LD26135p
           protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +3

Query: 78  LARSPND*IIICKNTQTWKCKLRKKLNIWKLMTAKKSTLSRLFCAIPC 221
           L  S +D I  C  T+    +L    N WKL+  K++TL   F AI C
Sbjct: 54  LCLSRDDAISTCICTECCS-QLESFHNFWKLVELKQTTLCSQFLAIDC 100


>AE014298-875|AAF46151.1|  562|Drosophila melanogaster CG12219-PA
           protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +3

Query: 78  LARSPND*IIICKNTQTWKCKLRKKLNIWKLMTAKKSTLSRLFCAIPC 221
           L  S +D I  C  T+    +L    N WKL+  K++TL   F AI C
Sbjct: 54  LCLSRDDAISTCICTECCS-QLESFHNFWKLVELKQTTLCSQFLAIDC 100


>AY051428-1|AAK92852.1|  405|Drosophila melanogaster GH10454p
           protein.
          Length = 405

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +2

Query: 53  LSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAE 232
           L D  L K G VAQ L Y+L     LE ++ +   Y++I     ++ +K  L+ S     
Sbjct: 273 LVDYQLPKYGTVAQDLLYFLLSSTKLEDKLAKFDYYIKIYHDNLVEHLK-ILKYSKPIPS 331

Query: 233 QRDLYALALK 262
            RD++    K
Sbjct: 332 LRDIHLALFK 341


>AE014297-3784|AAF56456.2|  405|Drosophila melanogaster CG10562-PA
           protein.
          Length = 405

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +2

Query: 53  LSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAE 232
           L D  L K G VAQ L Y+L     LE ++ +   Y++I     ++ +K  L+ S     
Sbjct: 273 LVDYQLPKYGTVAQDLLYFLLSSTKLEDKLAKFDYYIKIYHDNLVEHLK-ILKYSKPIPS 331

Query: 233 QRDLYALALK 262
            RD++    K
Sbjct: 332 LRDIHLALFK 341


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,909,102
Number of Sequences: 53049
Number of extensions: 200612
Number of successful extensions: 577
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)