Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2a21
         (180 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          21   5.2  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    21   6.9  
AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione S-tran...    20   9.1  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    20   9.1  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 54   SPSSFFNRCHIW 89
            SPSS  N+CH++
Sbjct: 1450 SPSSADNQCHVF 1461


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 108 TAPACQTICGTG*RTTTATINHV*XXVIYVAVVFTF 1
           T     T   TG R++   I++V    IY+ + F F
Sbjct: 260 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVF 295


>AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione
           S-transferase E5 protein.
          Length = 230

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 133 VCV*YRLKNGAGVS 92
           +C   RLKNGA V+
Sbjct: 215 ICESLRLKNGASVA 228


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 56  AVVVLQPVPHMV*HAGAVLQPVSHADAE 139
           AV + QPV  ++     V  PV+HA  +
Sbjct: 146 AVKIAQPVHKVIAQPVHVHAPVAHATVQ 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.135    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,774
Number of Sequences: 2352
Number of extensions: 2354
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 38
effective length of database: 474,603
effective search space used:  9966663
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)