Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2a18
(736 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC365.08c |||Der1-like |Schizosaccharomyces pombe|chr 2|||Manual 72 7e-14
SPAC1687.17c |||Der1-like |Schizosaccharomyces pombe|chr 1|||Manual 37 0.003
SPAC22E12.01 ||SPAC890.09|triose phosphate transporter |Schizosa... 33 0.042
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 31 0.17
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 28 1.2
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 27 2.1
SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces pomb... 27 2.8
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 27 3.7
SPAC17G8.11c |||mannosyltransferase complex subunit |Schizosacch... 26 4.8
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 26 4.8
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 26 4.8
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac... 26 6.4
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 26 6.4
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 26 6.4
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 8.5
>SPBC365.08c |||Der1-like |Schizosaccharomyces pombe|chr 2|||Manual
Length = 224
Score = 72.1 bits (169), Expect = 7e-14
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Frame = +1
Query: 238 EFRDWYNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTALFYY 417
+ ++ + +P TRY + T ++ L+SP +L + Q Q +R T Y
Sbjct: 8 QIQELLSRIPPVTRYILLGTAATTILTLCQLLSPSMLVLHYPLVVRQKQWYRLFTNYLY- 66
Query: 418 PINPGTGFHFLINCYFLYNYSQRFETGMFAGKPADYFYMLLFNWVCCVIIGLLVKL-PVL 594
GTGF F++N YF Y YS E +FA Y L+ + L+ L L
Sbjct: 67 ---AGTGFDFIMNIYFFYQYSTYLENFVFARNAKKYIIYLVKVALLIDAFSLISGLGSAL 123
Query: 595 MDPMVLSVLYVWCQLNKDVIVSFWFGTRFKAMYLPWVLLAFNLVISG 735
+ ++ Y W N + F FG + YLP+VLL F+ + G
Sbjct: 124 NQSLAAAIAYNWSLFNSFSKIQFLFGFHVQGKYLPYVLLGFSFLTGG 170
>SPAC1687.17c |||Der1-like |Schizosaccharomyces pombe|chr 1|||Manual
Length = 168
Score = 36.7 bits (81), Expect = 0.003
Identities = 23/116 (19%), Positives = 44/116 (37%)
Frame = +1
Query: 388 WRPLTALFYYPINPGTGFHFLINCYFLYNYSQRFETGMFAGKPADYFYMLLFNWVCCVII 567
WR +T Y + P G ++ FL + E + + +L W ++
Sbjct: 31 WRAITTFLY--VGP-FGLELILYLSFLLRFMSMLERSSPPPQTQSFLKTVLIVWFSLLVT 87
Query: 568 GLLVKLPVLMDPMVLSVLYVWCQLNKDVIVSFWFGTRFKAMYLPWVLLAFNLVISG 735
+P ++LY+W + +S KA Y+PWV++ + +G
Sbjct: 88 SYFSYMPFAASYFSFTMLYIWSWKHPLYRISILGLFDVKAPYVPWVMVLLRWLRTG 143
>SPAC22E12.01 ||SPAC890.09|triose phosphate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 33.1 bits (72), Expect = 0.042
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 520 DYFYMLLFNWVCCVIIGLLVKLP-VLMDPMVLSVLYVWCQLNKDVIVSFWFGTRFKAMYL 696
+YFY +C ++ GL + L ++ + LS Y C+ + +I F+F F+
Sbjct: 122 EYFYRA---GICALVTGLDIGLSNASLETITLS-FYTMCR-SSILIFVFFFSVIFRIEMF 176
Query: 697 PWVLLAFNLVIS 732
W+LL LVIS
Sbjct: 177 DWILLCITLVIS 188
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 31.1 bits (67), Expect = 0.17
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -1
Query: 520 QLASLQTCRSQIFESSCTKSNSLSGSEILCLDLLDSKTKLLMDAISEI 377
++ L TC + IFES C+++ + + + C+D + K+L++ +I
Sbjct: 1097 KMLDLTTCINGIFESLCSENENTRSNALSCIDHYLNAHKMLLNTTLDI 1144
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +3
Query: 267 VFHQILDDFYYCIEFVW*IWACKPLLFYTGFLLFLQSISDMASINSFVLLSNKSRHRISL 446
+ +++L FY IW C +FY+ ++F+ S S S+ N+ I
Sbjct: 195 LLNEVLHPFYLFQAVSVLIWLCDSFVFYSCCIVFISSYSIFLSVKESKESENRIHSIIGA 254
Query: 447 P 449
P
Sbjct: 255 P 255
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 674 VPNQNDTITSLLS*HHTYNTESTIGSINTGNLTSNPMITQHTQLNKSM 531
VP+ NDT L S H ++S I + P HT L+KS+
Sbjct: 621 VPSANDTSKQLASLHDMRKSQSPI-CARSATSAGLPRFEYHTSLSKSL 667
>SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 710
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +1
Query: 547 WVCCVIIGLLVKLPVLMDPMVLSVLYVWCQLNKDVIVSFWFGTRFKAMY 693
WV C++IG+ + + +L+ P VL +W ++ + +I F F + +A+Y
Sbjct: 173 WVMCMVIGIPLLIFLLISP-VLQTPALW-EIVETMITLFQF-AQIQALY 218
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 354 GFLLFLQSISDMASINSFVL--LSNKSRHRISLPDK 455
G +L + SI S+ +F L KS+H+ISLP+K
Sbjct: 431 GNVLLMTSIDGFCSVITFEPGELGVKSQHKISLPEK 466
>SPAC17G8.11c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 26.2 bits (55), Expect = 4.8
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 160 DIYDIVLCNNKSVCANEIIRKSWKMSEFRDWYNG 261
D+Y+ + +N+S +II ++WK +E + + G
Sbjct: 43 DVYNHEIYSNQSAAIPKIIHQTWKTNEIPEKWVG 76
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 532 MLLFNWVCCVIIG-LLVKLPVLMDPMVLSVLYVWC 633
+LLF W+C ++ LLV +P+ + +Y WC
Sbjct: 964 LLLFCWICSTLVTVLLVFVPLSLG----RAIYAWC 994
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 26.2 bits (55), Expect = 4.8
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +1
Query: 352 LDFYYFFNQFQIWRPL----TALFYYPINPGTGFHFLINCYFLYNYSQRFETGMFAGKPA 519
LD++ F+ + W+ L + L+ P N F L+ F+ +Y +FA +
Sbjct: 595 LDYFLLFD-LKFWKRLRGLLSKLYVVPFNRNLLFKRLMGIRFVIHYRSLATAFLFADREP 653
Query: 520 DYFYMLL 540
D+ M L
Sbjct: 654 DHSVMFL 660
>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 388 WRPLTALFYYPINPGTGFHFLINCYFLYNY 477
W+ L AL PI F+ L+ CY++Y+Y
Sbjct: 446 WKLLVALGMTPIL--YSFYALLCCYYIYSY 473
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 219 KILENVGIPRLVQWCTVFH 275
+ILE G+ + VQWC H
Sbjct: 1095 EILETRGVKKTVQWCEEMH 1113
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 25.8 bits (54), Expect = 6.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +1
Query: 262 VPFFTRYWMTFTIVLSLFGKFGLVS-PYYFI---LDFYYFFNQFQIWRP 396
VP+ TR ++TF+I L+ + G++S P + Y +N IW P
Sbjct: 1173 VPYNTRNFITFSIPRLLYEQGGILSVPGLNTSRGFETKYLYNLMNIWNP 1221
>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 333 YKPKFTKQTQYNSKSHPISGEKRY 262
YK + YN+KS I EKRY
Sbjct: 10 YKYRHLNLEAYNAKSRAIENEKRY 33
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,122,308
Number of Sequences: 5004
Number of extensions: 70728
Number of successful extensions: 225
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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