Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2a16
         (119 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    21   6.8  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    20   9.0  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 36   TKGHEKARPSRRANV 80
            T+G E A P RR  V
Sbjct: 1100 TEGRESAHPERREQV 1114


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 10  ALTLNPMFAPRDMKKQGPVVVLM 78
           ALTLNP     D+ K   VV L+
Sbjct: 111 ALTLNPTLVKIDVPKCEMVVKLI 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,319
Number of Sequences: 2352
Number of extensions: 1152
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 20
effective length of database: 516,939
effective search space used:  9821841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)