Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2a16
         (119 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p pro...    31   0.29 
AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p pro...    31   0.29 
AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA...    31   0.29 

>BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p
           protein.
          Length = 188

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +3

Query: 6   PRSHTKPYVRTKGH--EKARPSR 68
           P SHT+PYVR+KG   E+AR  R
Sbjct: 159 PHSHTRPYVRSKGRKFERARGRR 181


>AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p
           protein.
          Length = 188

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +3

Query: 6   PRSHTKPYVRTKGH--EKARPSR 68
           P SHT+PYVR+KG   E+AR  R
Sbjct: 159 PHSHTRPYVRSKGRKFERARGRR 181


>AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA
           protein.
          Length = 188

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +3

Query: 6   PRSHTKPYVRTKGH--EKARPSR 68
           P SHT+PYVR+KG   E+AR  R
Sbjct: 159 PHSHTRPYVRSKGRKFERARGRR 181


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,898,056
Number of Sequences: 53049
Number of extensions: 50803
Number of successful extensions: 118
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 24,988,368
effective HSP length: 20
effective length of database: 23,927,388
effective search space used: 454620372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)