Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2a15
(378 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 37 8e-05
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 37 8e-05
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 37 8e-05
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 35 2e-04
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 35 2e-04
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 23 1.3
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 3.1
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 4.1
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 20 7.2
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 20 7.2
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 20 9.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 20 9.5
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 20 9.5
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 20 9.5
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 20 9.5
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 20 9.5
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 36.7 bits (81), Expect = 8e-05
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 167 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSS 343
ES P ++ LTL + ++ E + A L + W D L WN E+G L ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 344 ERLWRPDVVL 373
+LW+PDV++
Sbjct: 83 NKLWKPDVLM 92
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 36.7 bits (81), Expect = 8e-05
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 167 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSS 343
ES P ++ LTL + ++ E + A L + W D L WN E+G L ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 344 ERLWRPDVVL 373
+LW+PDV++
Sbjct: 83 NKLWKPDVLM 92
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 36.7 bits (81), Expect = 8e-05
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 167 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSS 343
ES P ++ LTL + ++ E + A L + W D L WN E+G L ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 344 ERLWRPDVVL 373
+LW+PDV++
Sbjct: 83 NKLWKPDVLM 92
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 35.1 bits (77), Expect = 2e-04
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLM 92
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 35.1 bits (77), Expect = 2e-04
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLM 92
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 22.6 bits (46), Expect = 1.3
Identities = 12/56 (21%), Positives = 22/56 (39%)
Frame = +2
Query: 29 SCHKMSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVV 196
+C ++ T + F TC I +CE + +D ++ R KI +
Sbjct: 174 ACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTLRNLDKIVTNGFRNVAESRKIFI 229
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 109 AFCRTSYSTSEEKR*QNNIS 50
A C YST EEK Q N S
Sbjct: 1374 AVCDACYSTIEEKNLQVNES 1393
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 4.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 231 RMLACLKCRVRLTTILESGGDSRS 160
R+ C++C ILE GD S
Sbjct: 509 RLFTCMECPNNYPWILEPTGDGFS 532
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 253 DTGRSSNELDRQTTELERRGMGL 321
D GR+S D+ RRG+ L
Sbjct: 7 DAGRASKGQDKHMVHWFRRGLRL 29
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 318 AAALGWCPRN 347
A ALGW P N
Sbjct: 157 AQALGWAPTN 166
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -1
Query: 231 RMLACLKCRVRLTTILESGGDSRS 160
R+ C++C IL+ GD S
Sbjct: 502 RLFTCMECPNNYPWILDPTGDGFS 525
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 88 YS*CGRMRKRNITVPHD 138
Y C R++KR TV D
Sbjct: 2603 YEICERVKKRGWTVTRD 2619
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 19.8 bits (39), Expect = 9.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +2
Query: 185 KIVVNLTLHLRHANIRESESTVRILADLQMNW 280
K++ NL + H NIRE +A W
Sbjct: 95 KLLKNLKMVQNHNNIREKSHYCLFVASNCFFW 126
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 19.8 bits (39), Expect = 9.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +2
Query: 185 KIVVNLTLHLRHANIRESESTVRILADLQMNW 280
K++ NL + H NIRE +A W
Sbjct: 95 KLLKNLKMVQNHNNIREKSHYCLFVASNCFFW 126
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 144 ESIMRDSDVAFSHSAALAIAQV 79
+ + DSD+ +SA+ AIA +
Sbjct: 567 DKLTADSDIDVKYSASEAIAGI 588
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 274 HLKICQYPHGGLGLTNVSMSQMQGQV 197
+LK YP GLGL + + + +
Sbjct: 33 YLKSAPYPVPGLGLHGLPVDSLHSSM 58
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,209
Number of Sequences: 336
Number of extensions: 1709
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 7803226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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