Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2a15
(378 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 40 5e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 40 9e-04
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 38 0.002
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 37 0.006
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 37 0.006
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 36 0.008
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 36 0.011
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.011
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 33 0.077
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 33 0.077
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.13
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.18
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 31 0.23
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 0.41
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 30 0.72
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.95
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 29 0.95
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 27 3.8
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_33848| Best HMM Match : RasGEF_N (HMM E-Value=2.3e-13) 27 5.1
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) 27 6.7
SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_33752| Best HMM Match : I-set (HMM E-Value=3.7e-15) 26 8.8
SB_27527| Best HMM Match : MFAP1_C (HMM E-Value=0.57) 26 8.8
SB_38580| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_30129| Best HMM Match : Y_phosphatase (HMM E-Value=6.7e-13) 26 8.8
SB_25168| Best HMM Match : C_tripleX (HMM E-Value=1.1) 26 8.8
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 40.3 bits (90), Expect = 5e-04
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +2
Query: 146 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 310
L TY+++ P D + V L L L ++ + T+ ++ ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 311 EW-GCXTWLVSSERLWRPDVVL 373
+ G ++ + RLW PD+ L
Sbjct: 80 AYDGVDNIVIKASRLWLPDITL 101
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 39.5 bits (88), Expect = 9e-04
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 MNWIDKRLSWNAGEW-GCXTWLVSSERLWRPDVVL 373
+ W++ LSWNA E+ G T V +RLW PD+VL
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVL 111
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +2
Query: 134 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 298
+++ L Y +++ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 299 WNAGEW-GCXTWLVSSERLWRPDVVL 373
WN ++ G + +++ +++W+PDV+L
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLL 538
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +2
Query: 134 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 298
++ LL Y +++ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 299 WNAGEWGCXTWL-VSSERLWRPDVVL 373
WN ++G + ++ +R+W+PDV+L
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLL 120
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 36.7 bits (81), Expect = 0.006
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = +2
Query: 110 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 274
++ L L+ D Y++ P D + V + + + + + ++L ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 275 NWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
NW + L WNA E+G L +S +W PD+VL
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVL 120
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 36.7 bits (81), Expect = 0.006
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 251 RILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+++ + + W + LSWNA E+G + + VS +R W PD++L
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILL 57
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 36.3 bits (80), Expect = 0.008
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 200 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCXTWLVSSERLWRPDVVLL 376
LTL+ H ++E ++ L+ W D RL+WN E+ G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 35.9 bits (79), Expect = 0.011
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 245 TVRILADLQMNWIDKRLSWNAGEWGCXTWLVSSER--LWRPDVVLL 376
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLL
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLL 77
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 35.9 bits (79), Expect = 0.011
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 245 TVRILADLQMNWIDKRLSWNAGEWGCXTWLVSSER--LWRPDVVLL 376
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLL
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLL 77
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 33.1 bits (72), Expect = 0.077
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 278 WIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
W + LSWNA E+G + + + ++LW+PD+ L
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYL 151
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 33.1 bits (72), Expect = 0.077
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEW-GCXTWLVSSERLWRPDVVL 373
+ + W D RL WN ++ G +++ S +LW PD+ L
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITL 312
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 32.3 bits (70), Expect = 0.13
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +2
Query: 41 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRH 220
M+ + LLPFL S E+ +++ L Y++E+ P V+N + +
Sbjct: 1 MAPLLLSLLPFLFVFPSLSVDHTEDVEHR--LLNDLFKDYNKEARP----VLNKSEAI-- 52
Query: 221 ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
E + + + + W++ L+W+ +G T + V+ +W+PD+VL
Sbjct: 53 ----EVQFDMAYAQLINLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVL 100
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 31.9 bits (69), Expect = 0.18
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 218 HANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCXTWLVSSERLWRPDVVL 373
H + + TV L W D L+WN ++ G + V +W PD+VL
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVL 251
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 31.5 bits (68), Expect = 0.23
Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 209 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCXTWLVSSERLWRPDVVL 373
HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIIL 161
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 31.1 bits (67), Expect = 0.31
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L+M W D L WN ++G T + + + +W P V++
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVII 583
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 30.7 bits (66), Expect = 0.41
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 134 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 307
+++ LL YDR P + V +TL L T+ + D+ W + L+WN
Sbjct: 15 LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62
Query: 308 GEW-GCXTWLVSSERLWRPDVVL 373
E+ G T VS +W PD+VL
Sbjct: 63 TEYGGLKTINVSPTIIWLPDIVL 85
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 29.9 bits (64), Expect = 0.72
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 185 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCXTWLVSSERLWRP 361
K +V LH + A + S S VR+ +++ W + L WN ++ G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 362 DVVL 373
D+VL
Sbjct: 127 DIVL 130
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 29.5 bits (63), Expect = 0.95
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ + W + L+W+ +G T + V R+WRPD++L
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLIL 111
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 29.5 bits (63), Expect = 0.95
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+++ W D L+WN ++G + V +W+PD++L
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILL 62
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 235 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 131
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 27.5 bits (58), Expect = 3.8
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 286 VDPIHLKICQYPHGGLGLTNVSMSQMQGQVDYDFGVGGRLPIV 158
+D I LK+ + GL+ + +QG V YDFG+ LP+V
Sbjct: 368 LDEIALKLPEPVRVTPGLSYCVKAHIQGPVKYDFGITA-LPVV 409
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 27.1 bits (57), Expect = 5.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 278 WIDKRLSWNAGEWGCXTWLVSSERLWRPDVVLL 376
W D L W+ ++ S + +W PDV L+
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLI 436
>SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 27.1 bits (57), Expect = 5.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 332 AKCXSPIPLRSNSVVCRSNSFEDL 261
++C +P+R VCR N F DL
Sbjct: 1223 SECLEELPIREAVKVCRHNCFNDL 1246
>SB_33848| Best HMM Match : RasGEF_N (HMM E-Value=2.3e-13)
Length = 899
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 318 PHSPAFQLSRLSIQF--I*RSASIRTVDSDSRMLAC 217
PHS A QLS L++ F R ++R+VD L C
Sbjct: 113 PHSRAMQLSGLAVAFSRYDRKRNLRSVDEGDGELLC 148
>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
Length = 229
Score = 26.6 bits (56), Expect = 6.7
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +2
Query: 113 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 280
NA +LS+ I+ LA+YDR+ P+ + V + + + + E E+ + D L+ W
Sbjct: 15 NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74
Query: 281 IDKRLSWNAGE 313
D R N E
Sbjct: 75 YDPRFKSNFTE 85
>SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 961
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 313 FPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQVDY 191
FPC Q F P ++C H G ++ + +VDY
Sbjct: 437 FPCSKIQRFFRPRRSELCVLLHAGYPRNSLKVDYYGLKVDY 477
>SB_33752| Best HMM Match : I-set (HMM E-Value=3.7e-15)
Length = 783
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 205 GQVDYDFGVGGRLPIVRCEERVDHEGQ*CCV 113
G+V + G GG+ +V E D +G+ CCV
Sbjct: 373 GRVRFTSGEGGKHALVIEEVEDDDQGEYCCV 403
>SB_27527| Best HMM Match : MFAP1_C (HMM E-Value=0.57)
Length = 818
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2
Query: 377 LAVPRQASTSVPRTPAKCXSPIPLRSNSV 291
L++P A++S P TPA SP P SNS+
Sbjct: 680 LSLPCTAASS-PSTPASSPSPTPPLSNSL 707
>SB_38580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 990
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 161 DRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKR 292
D E+ PD N +H IRE ++T + D N I+K+
Sbjct: 16 DGETSPDQGKSDNNAKKRKHETIREVDNTDHVKTDKDNNKIEKK 59
>SB_30129| Best HMM Match : Y_phosphatase (HMM E-Value=6.7e-13)
Length = 139
Score = 26.2 bits (55), Expect = 8.8
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -3
Query: 238 GLTNVSMSQMQGQVDYDFGVGGRLP-IVRCEERVDHEGQ*CCV 113
GL+ + + GQV Y GR P IV C V G C V
Sbjct: 64 GLSRCQLIDLIGQVQYWQAESGRHPIIVHCSAGVGRTGVFCAV 106
>SB_25168| Best HMM Match : C_tripleX (HMM E-Value=1.1)
Length = 201
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 35 HKMSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLL 151
+++STTYI+ L+T A+ + A C + + ID ++
Sbjct: 15 NQISTTYIMNHAVLVTLAMCAVAACMGSVQANDWIDDMV 53
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,129,148
Number of Sequences: 59808
Number of extensions: 240549
Number of successful extensions: 729
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 632178915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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