Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2a15
(378 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 43 1e-04
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 43 1e-04
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 43 1e-04
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 43 1e-04
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 43 1e-04
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 42 3e-04
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 41 6e-04
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 40 8e-04
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 40 8e-04
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 40 8e-04
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 39 0.002
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 38 0.003
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 38 0.003
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 38 0.004
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 38 0.004
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 38 0.004
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 38 0.004
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 38 0.006
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 38 0.006
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 38 0.006
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 38 0.006
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 36 0.013
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 36 0.013
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 36 0.013
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 36 0.013
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 36 0.013
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 36 0.013
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 35 0.030
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 35 0.030
AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p pro... 35 0.030
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 35 0.030
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 35 0.030
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 35 0.030
AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF... 35 0.030
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 35 0.030
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 35 0.030
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 35 0.040
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 35 0.040
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 35 0.040
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 34 0.053
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 34 0.053
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 34 0.053
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 34 0.053
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 34 0.053
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 34 0.070
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 34 0.070
AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein. 30 0.86
AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA... 30 0.86
AY069859-1|AAL40004.1| 313|Drosophila melanogaster SD10415p pro... 29 1.5
AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,... 29 2.0
AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,... 29 2.0
BT025952-1|ABG02196.1| 93|Drosophila melanogaster IP15265p pro... 28 3.5
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Frame = +2
Query: 59 ILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA- 223
+LL LL C A N + L D LL+ Y+R P S ++V L L L
Sbjct: 28 LLLVLLLLCETVQA----NPDAKRLY-DDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLI 82
Query: 224 --NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
N+++ T + L+ W D + W+ E+G T L V SE +W PD+VL
Sbjct: 83 DLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVL 133
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Frame = +2
Query: 59 ILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA- 223
+LL LL C A N + L D LL+ Y+R P S ++V L L L
Sbjct: 28 LLLVLLLLCETVQA----NPDAKRLY-DDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLI 82
Query: 224 --NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
N+++ T + L+ W D + W+ E+G T L V SE +W PD+VL
Sbjct: 83 DLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVL 133
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Frame = +2
Query: 59 ILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA- 223
+LL LL C A N + L D LL+ Y+R P S ++V L L L
Sbjct: 28 LLLVLLLLCETVQA----NPDAKRLY-DDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLI 82
Query: 224 --NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
N+++ T + L+ W D + W+ E+G T L V SE +W PD+VL
Sbjct: 83 DLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVL 133
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Frame = +2
Query: 59 ILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA- 223
+LL LL C A N + L D LL+ Y+R P S ++V L L L
Sbjct: 28 LLLVLLLLCETVQA----NPDAKRLY-DDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLI 82
Query: 224 --NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
N+++ T + L+ W D + W+ E+G T L V SE +W PD+VL
Sbjct: 83 DLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVL 133
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Frame = +2
Query: 59 ILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA- 223
+LL LL C A N + L D LL+ Y+R P S ++V L L L
Sbjct: 28 LLLVLLLLCETVQA----NPDAKRLY-DDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLI 82
Query: 224 --NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
N+++ T + L+ W D + W+ E+G T L V SE +W PD+VL
Sbjct: 83 DLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVL 133
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +2
Query: 134 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 292
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 28 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 85
Query: 293 LSWNAGEWG-CXTWLVSSERLWRPDVVL 373
L WN ++G T V SE +W PD+VL
Sbjct: 86 LKWNPDDYGGVDTLHVPSEHIWHPDIVL 113
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 40.7 bits (91), Expect = 6e-04
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +2
Query: 134 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 292
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 28 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 85
Query: 293 LSWNAGEWG-CXTWLVSSERLWRPDVVL 373
L WN ++G T V SE +W PD+VL
Sbjct: 86 LKWNPDDYGGVDTLHVPSEHIWLPDIVL 113
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +2
Query: 134 MIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILADLQMNWIDKR 292
+ D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +
Sbjct: 10 LYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 67
Query: 293 LSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L W E+G L V S+ +WRPD+VL
Sbjct: 68 LKWEPKEYGGVEMLHVPSDHIWRPDIVL 95
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +2
Query: 134 MIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILADLQMNWIDKR 292
+ D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +
Sbjct: 29 LYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 86
Query: 293 LSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L W E+G L V S+ +WRPD+VL
Sbjct: 87 LKWEPKEYGGVEMLHVPSDHIWRPDIVL 114
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +2
Query: 134 MIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILADLQMNWIDKR 292
+ D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +
Sbjct: 29 LYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 86
Query: 293 LSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L W E+G L V S+ +WRPD+VL
Sbjct: 87 LKWEPKEYGGVEMLHVPSDHIWRPDIVL 114
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Frame = +2
Query: 62 LLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRE 235
L ++L+ + A N + L D LL+ Y++ P ++ V+ + + L+ + + +
Sbjct: 21 LRAWILSALMVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTTDVLKVCIKLKLSQLID 79
Query: 236 SESTVRILAD---LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+I+ ++ +W D +L W E+G L V S+ +WRPD+VL
Sbjct: 80 VNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVL 129
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +2
Query: 104 ECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQ 271
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 272 MNWIDKRLSWNAGEWGCXTWLVSSERLWRPD 364
+W+DKRL++ + + R+W+PD
Sbjct: 162 QSWVDKRLAFEGAQDTLALSVSMLARIWKPD 192
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +2
Query: 104 ECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQ 271
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 272 MNWIDKRLSWNAGEWGCXTWLVSSERLWRPD 364
+W+DKRL++ + + R+W+PD
Sbjct: 162 QSWVDKRLAFEGAQDTLALSVSMLARIWKPD 192
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 12 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 71
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ A L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 72 KNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 12 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 71
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ A L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 72 KNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 12 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 71
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ A L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 72 KNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 12 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 71
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ A L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 72 KNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 134 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 298
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 14 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLR 73
Query: 299 WNAGEWGCXTWL-VSSERLWRPDVVL 373
W+ E+G L V SE +W PD+VL
Sbjct: 74 WDPEEYGGVEQLYVPSEHIWVPDIVL 99
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 134 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 298
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLR 92
Query: 299 WNAGEWGCXTWL-VSSERLWRPDVVL 373
W+ E+G L V SE +W PD+VL
Sbjct: 93 WDPEEYGGVEQLYVPSEHIWVPDIVL 118
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 134 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 298
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLR 92
Query: 299 WNAGEWGCXTWL-VSSERLWRPDVVL 373
W+ E+G L V SE +W PD+VL
Sbjct: 93 WDPEEYGGVEQLYVPSEHIWVPDIVL 118
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 134 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 298
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLR 92
Query: 299 WNAGEWGCXTWL-VSSERLWRPDVVL 373
W+ E+G L V SE +W PD+VL
Sbjct: 93 WDPEEYGGVEQLYVPSEHIWVPDIVL 118
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 149
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 149
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 91 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 127
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 149
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 149
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 94 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 130
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 224 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
N+ E ++ L++ W D +L W+ ++G L + +++W+PD+VL
Sbjct: 66 NVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL 116
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 35.1 bits (77), Expect = 0.030
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 26 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 85
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 86 KNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 132
>AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p
protein.
Length = 121
Score = 35.1 bits (77), Expect = 0.030
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 12 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 71
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 72 KNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 35.1 bits (77), Expect = 0.030
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 12 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 71
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 72 KNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 35.1 bits (77), Expect = 0.030
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 12 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 71
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 72 KNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 35.1 bits (77), Expect = 0.030
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 12 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 71
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 72 KNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF,
isoform F protein.
Length = 121
Score = 35.1 bits (77), Expect = 0.030
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 12 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 71
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 72 KNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 35.1 bits (77), Expect = 0.030
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 12 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 71
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 72 KNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 35.1 bits (77), Expect = 0.030
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 71 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRE 235
F+L +A E +++ LL+TY+ P + V L L+ ++ E
Sbjct: 12 FVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDE 71
Query: 236 SESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
+ L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 72 KNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 224 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
N+ E ++ L++ W D +L W+ ++G L + +++W+PD+VL
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL 116
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 224 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
N+ E ++ L++ W D +L W+ ++G L + +++W+PD+VL
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL 116
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 224 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
N+ E ++ L++ W D +L W+ ++G L + +++W+PD+VL
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL 116
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 34.3 bits (75), Expect = 0.053
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L++ W D L WN ++G L + R+W+PDV++
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLM 401
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 34.3 bits (75), Expect = 0.053
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L++ W D L WN ++G L + R+W+PDV++
Sbjct: 364 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLM 400
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 34.3 bits (75), Expect = 0.053
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L++ W D L WN ++G L + R+W+PDV++
Sbjct: 316 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLM 352
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 34.3 bits (75), Expect = 0.053
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L++ W D L WN ++G L + R+W+PDV++
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLM 401
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 34.3 bits (75), Expect = 0.053
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L++ W D L WN ++G L + R+W+PDV++
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLM 401
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 33.9 bits (74), Expect = 0.070
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 133
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 33.9 bits (74), Expect = 0.070
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVL 373
L + W D L WN E+G L ++ +LW+PDV++
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 133
>AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein.
Length = 388
Score = 30.3 bits (65), Expect = 0.86
Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +2
Query: 119 TSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLS 298
T ++ L + S P + ++ R ++ S ++ + M+W D RL
Sbjct: 17 TKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLV 76
Query: 299 WNAGEWGCXTWLVSSE-RLWRPDVVLL 376
W ++G + R+W+P + +L
Sbjct: 77 WKPEDFGSLESFEHPDLRIWKPHMNVL 103
>AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA
protein.
Length = 585
Score = 30.3 bits (65), Expect = 0.86
Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +2
Query: 119 TSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLS 298
T ++ L + S P + ++ R ++ S ++ + M+W D RL
Sbjct: 214 TKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLV 273
Query: 299 WNAGEWGCXTWLVSSE-RLWRPDVVLL 376
W ++G + R+W+P + +L
Sbjct: 274 WKPEDFGSLESFEHPDLRIWKPHMNVL 300
>AY069859-1|AAL40004.1| 313|Drosophila melanogaster SD10415p
protein.
Length = 313
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 119 TSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLS 298
T ++ L + S P + ++ R ++ S ++ + M+W D RL
Sbjct: 214 TKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLV 273
Query: 299 WNAGEWGCXTWLVSSE-RLWRP 361
W ++G + R+W+P
Sbjct: 274 WKPEDFGSLESFEHPDLRIWKP 295
>AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,
isoform A protein.
Length = 1379
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 95 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 244
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
>AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,
isoform B protein.
Length = 1397
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 95 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 244
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
>BT025952-1|ABG02196.1| 93|Drosophila melanogaster IP15265p
protein.
Length = 93
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 95 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 244
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-ERCKSVTLLPLPSNSGSISESSS 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,949,644
Number of Sequences: 53049
Number of extensions: 372556
Number of successful extensions: 1134
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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