Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2a14
(785 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 26 0.46
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 0.80
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 23 4.3
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 5.6
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 7.4
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 7.4
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 7.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 7.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 7.4
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 9.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.8
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 9.8
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 25.8 bits (54), Expect = 0.46
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 602 RIKLARMTALWIGNGCVPPSVLLVLVNEH 688
R + ++ +W+G C+ LL++ NEH
Sbjct: 156 RRMIVYVSLVWLGAACISLPPLLIMGNEH 184
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 161 MSQKVEKPVLSGQRIKT 211
M QK+EKPVLS T
Sbjct: 314 MLQKLEKPVLSSSTTTT 330
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 25.0 bits (52), Expect = 0.80
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 93 ACSEKKETL*CSLFPCARDNVCGVAGYP 10
AC + E + P +++VCGV G P
Sbjct: 521 ACRPRHEIRSTDVIPGTQEHVCGVKGIP 548
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 608 KLARMTALWIGNGC 649
KL RMT W+G C
Sbjct: 1 KLWRMTGTWVGGFC 14
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 296 LDAAYKYLDSAGSKLDYRRYGEVIFDVLI 382
+D Y LDS ++ YG + DV++
Sbjct: 163 MDLHYYPLDSQNCTVEIESYGYTVLDVVM 191
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 7.4
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = -2
Query: 724 QHEVQRQVVLQQMFVHQDQQHGWRHASVTDPQCSHARQLDALFGIEAFQVDQNL 563
Q + + Q Q ++ HQ HG S S +Q L G+ V Q +
Sbjct: 791 QSQQRHQHAAQMIYGHQQSHHGLHINSSPSSVQSGQQQQSVLQGLGVQGVQQGV 844
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/25 (24%), Positives = 17/25 (68%)
Frame = +2
Query: 158 CMSQKVEKPVLSGQRIKTRKRDEKE 232
C++ +++ + +R +T++RD+ E
Sbjct: 170 CLAMGMKREAVQEERQRTKERDQSE 194
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/25 (24%), Positives = 17/25 (68%)
Frame = +2
Query: 158 CMSQKVEKPVLSGQRIKTRKRDEKE 232
C++ +++ + +R +T++RD+ E
Sbjct: 170 CLAMGMKREAVQEERQRTKERDQSE 194
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 7.4
Identities = 9/44 (20%), Positives = 20/44 (45%)
Frame = +2
Query: 161 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGG 292
+ ++++P+ Q + ++E+Y + AL Q GG
Sbjct: 1640 LGDRMQRPMKESQENQQNAETQRERYYATIHKVALQQAANTGGG 1683
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 7.4
Identities = 9/44 (20%), Positives = 20/44 (45%)
Frame = +2
Query: 161 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGG 292
+ ++++P+ Q + ++E+Y + AL Q GG
Sbjct: 1636 LGDRMQRPMKESQENQQNAETQRERYYATIHKVALQQAANTGGG 1679
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 9.8
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = -1
Query: 197 DPIILVFLPSDSYNILILTGYVGAFYSFCEFSRTAPVQKRKKRYDVLYSLVLETM 33
DP+ +V + Y ++ +TG VG + +R + Y L+SL + +
Sbjct: 48 DPLYIVLPITVIYAVIFVTGLVGNVSTCVVIARNKSMHTATNYY--LFSLAVSDL 100
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 30 CGVAGYPVKS 1
C VAGYP++S
Sbjct: 512 CPVAGYPIES 521
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 163 ESEGRKTSIIGSTD 204
ESE R+ S +GST+
Sbjct: 371 ESENRRNSCLGSTE 384
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,247
Number of Sequences: 438
Number of extensions: 5387
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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