Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2a08
         (336 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1Q462 Cluster: Putative uncharacterized protein; n=2; ...    31   5.1  
UniRef50_Q7PK41 Cluster: ENSANGP00000025261; n=1; Anopheles gamb...    30   8.9  

>UniRef50_Q1Q462 Cluster: Putative uncharacterized protein; n=2;
           Candidatus Kuenenia stuttgartiensis|Rep: Putative
           uncharacterized protein - Candidatus Kuenenia
           stuttgartiensis
          Length = 100

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 183 ILHIFVNLSTEILMQLALVLCNIHLCPTNYMEI-YC 287
           ++  F+N S  I++ L  ++CN++LC   Y  + YC
Sbjct: 31  VIRFFLNQSVTIILNLMTLVCNLNLCVYAYNGVMYC 66


>UniRef50_Q7PK41 Cluster: ENSANGP00000025261; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000025261 - Anopheles gambiae
           str. PEST
          Length = 393

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +3

Query: 111 SIY*ARRGCALEHIPPAALRLAYVILHIFVNLSTEILMQLALVLC 245
           S+Y AR+ C +     AA+ L   I HIF  L   +L+Q+ + LC
Sbjct: 207 SVYTARQWCLIVDRYGAAVNLVNEINHIFSELLLVMLVQVQVQLC 251


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,791,360
Number of Sequences: 1657284
Number of extensions: 5194327
Number of successful extensions: 10441
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10440
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)