Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2a08
         (336 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   2.0  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   2.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   2.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   2.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   4.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   6.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    20   6.0  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 243 CNIHLCPTNYMEIYCK 290
           C +  C   Y+EI CK
Sbjct: 774 CTVCTCDAKYLEIKCK 789


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 14  ISQSISKMKCSAPPPGRSVVVTLC 85
           ++Q  S  K  APP  R +  TLC
Sbjct: 400 VTQKPSSTKAPAPP-SRDLTTTLC 422


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +3

Query: 198 VNLSTEILMQLALVLCNIH 254
           +NL  +I++ + L++ N+H
Sbjct: 56  INLLVQIILDVILLILNVH 74


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +3

Query: 198 VNLSTEILMQLALVLCNIH 254
           +NL  +I++ + L++ N+H
Sbjct: 56  INLLVQIILDVILLILNVH 74


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +3

Query: 198 VNLSTEILMQLALVLCNIH 254
           +NL  +I++ + L++ N+H
Sbjct: 376 INLLVQIILDVILLILNVH 394


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 265  PTTWKFIVNDSVNLIIKYKSPKKK 336
            PT+ +   ND  +L++ +K P ++
Sbjct: 999  PTSIRVETNDQHSLVVYWKPPARE 1022


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 187  NITYANLSAAGGMCSSAHPLRA 122
            N T   L+ +GG   S+HPL A
Sbjct: 972  NNTGDALAPSGGKKGSSHPLAA 993


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 320 LYFIIRFTLSFTINF 276
           L+F+I   +SF +NF
Sbjct: 138 LFFVILLWISFFLNF 152


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 81  NVTTTDRPGGGALHFILE 28
           N ++TD+ G GA++ +L+
Sbjct: 48  NKSSTDKFGNGAIYEVLK 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,376
Number of Sequences: 336
Number of extensions: 1487
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)