Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2a08
         (336 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126197-1|AAI26198.1|  592|Homo sapiens solute carrier family 6...    28   6.2  
AL389979-1|CAB97535.1|  361|Homo sapiens XT3 orphan transporter ...    28   6.2  
AJ289880-2|CAB96872.1|  592|Homo sapiens orphan transporter XT3 ...    28   6.2  
AJ276208-1|CAB99311.1|  555|Homo sapiens orphan transporter XT3a...    28   6.2  
AJ276207-1|CAB99310.1|  592|Homo sapiens orphan transporter XT3 ...    28   6.2  
AF125107-1|AAL75944.1|  616|Homo sapiens neurotransmitter transp...    28   6.2  

>BC126197-1|AAI26198.1|  592|Homo sapiens solute carrier family 6
           (proline IMINO transporter), member 20 protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -3

Query: 184 ITYANLSAAGGMCSSAHPLRAQ*ILPQVHNLNLAQRYDYRSSWGWSATLHFRDTLRN 14
           +T +NL    G  +SA+P +   + PQ+ N +L    D        A + + + ++N
Sbjct: 328 LTASNLEQVKGYLASAYPSKYSEMFPQIKNCSLESELDTAVQGTGLAFIVYTEAIKN 384


>AL389979-1|CAB97535.1|  361|Homo sapiens XT3 orphan transporter
           protein.
          Length = 361

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -3

Query: 184 ITYANLSAAGGMCSSAHPLRAQ*ILPQVHNLNLAQRYDYRSSWGWSATLHFRDTLRN 14
           +T +NL    G  +SA+P +   + PQ+ N +L    D        A + + + ++N
Sbjct: 97  LTASNLEQVKGYLASAYPSKYSEMFPQIKNCSLESELDTAVQGTGLAFIVYTEAIKN 153


>AJ289880-2|CAB96872.1|  592|Homo sapiens orphan transporter XT3
           protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -3

Query: 184 ITYANLSAAGGMCSSAHPLRAQ*ILPQVHNLNLAQRYDYRSSWGWSATLHFRDTLRN 14
           +T +NL    G  +SA+P +   + PQ+ N +L    D        A + + + ++N
Sbjct: 328 LTASNLEQVKGYLASAYPSKYSEMFPQIKNCSLESELDTAVQGTGLAFIVYTEAIKN 384


>AJ276208-1|CAB99311.1|  555|Homo sapiens orphan transporter XT3a
           protein.
          Length = 555

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -3

Query: 184 ITYANLSAAGGMCSSAHPLRAQ*ILPQVHNLNLAQRYDYRSSWGWSATLHFRDTLRN 14
           +T +NL    G  +SA+P +   + PQ+ N +L    D        A + + + ++N
Sbjct: 291 LTASNLEQVKGYLASAYPSKYSEMFPQIKNCSLESELDTAVQGTGLAFIVYTEAIKN 347


>AJ276207-1|CAB99310.1|  592|Homo sapiens orphan transporter XT3
           protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -3

Query: 184 ITYANLSAAGGMCSSAHPLRAQ*ILPQVHNLNLAQRYDYRSSWGWSATLHFRDTLRN 14
           +T +NL    G  +SA+P +   + PQ+ N +L    D        A + + + ++N
Sbjct: 328 LTASNLEQVKGYLASAYPSKYSEMFPQIKNCSLESELDTAVQGTGLAFIVYTEAIKN 384


>AF125107-1|AAL75944.1|  616|Homo sapiens neurotransmitter
           transporter RB21A protein.
          Length = 616

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -3

Query: 184 ITYANLSAAGGMCSSAHPLRAQ*ILPQVHNLNLAQRYDYRSSWGWSATLHFRDTLRN 14
           +T +NL    G  +SA+P +   + PQ+ N +L    D        A + + + ++N
Sbjct: 352 LTASNLEQVKGYLASAYPSKYSEMFPQIKNCSLESELDTAVQGTGLAFIVYTEAIKN 408


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,601,129
Number of Sequences: 237096
Number of extensions: 799767
Number of successful extensions: 1302
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)