Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2a08
         (336 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2500|AAF57841.1|  817|Drosophila melanogaster CG18432-P...    28   2.6  
BT014663-1|AAT27287.1|  400|Drosophila melanogaster GH07226p pro...    28   3.5  
AE013599-3773|AAM68289.2|  400|Drosophila melanogaster CG3907-PB...    28   3.5  
AE013599-3772|AAF47137.3|  400|Drosophila melanogaster CG3907-PA...    28   3.5  
U34925-2|AAC46881.1| 2354|Drosophila melanogaster MEI-41 protein.      27   6.0  
AY282465-1|AAQ22732.1| 2517|Drosophila melanogaster Mei-41 protein.    27   6.0  
AE014298-2397|AAF48604.2| 2517|Drosophila melanogaster CG4252-PA...    27   6.0  

>AE013599-2500|AAF57841.1|  817|Drosophila melanogaster CG18432-PA
           protein.
          Length = 817

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 76  YDYRSSWGWSATLHFRDTLR 17
           Y+YRS+ GW + LH  D  R
Sbjct: 552 YEYRSTEGWGSALHLDDVQR 571


>BT014663-1|AAT27287.1|  400|Drosophila melanogaster GH07226p
           protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 247 LHNTKANCISISVDKLTNICNITYANLSAAGGMCSSAHP 131
           L N K N ++ SVD+L N C  +  N+ A      S  P
Sbjct: 334 LANNKNNMLAASVDQLKNFCIQSMGNIKAPSSEDGSVVP 372


>AE013599-3773|AAM68289.2|  400|Drosophila melanogaster CG3907-PB,
           isoform B protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 247 LHNTKANCISISVDKLTNICNITYANLSAAGGMCSSAHP 131
           L N K N ++ SVD+L N C  +  N+ A      S  P
Sbjct: 334 LANNKNNMLAASVDQLKNFCIQSMGNIKAPSSEDGSVVP 372


>AE013599-3772|AAF47137.3|  400|Drosophila melanogaster CG3907-PA,
           isoform A protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 247 LHNTKANCISISVDKLTNICNITYANLSAAGGMCSSAHP 131
           L N K N ++ SVD+L N C  +  N+ A      S  P
Sbjct: 334 LANNKNNMLAASVDQLKNFCIQSMGNIKAPSSEDGSVVP 372


>U34925-2|AAC46881.1| 2354|Drosophila melanogaster MEI-41 protein.
          Length = 2354

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 153  PPAALRLAYVILHIFVNLSTEILMQLALVLCNIHLCPTNYMEIY 284
            PP  +   Y  +H F+NL  ++L+  A   C  +    +Y+E Y
Sbjct: 1324 PPETIDSNYRKIHEFLNLIPKLLVSRASYNCGEYARALSYLESY 1367


>AY282465-1|AAQ22732.1| 2517|Drosophila melanogaster Mei-41 protein.
          Length = 2517

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 153  PPAALRLAYVILHIFVNLSTEILMQLALVLCNIHLCPTNYMEIY 284
            PP  +   Y  +H F+NL  ++L+  A   C  +    +Y+E Y
Sbjct: 1487 PPETIDSNYRKIHEFLNLIPKLLVSRASYNCGEYARALSYLESY 1530


>AE014298-2397|AAF48604.2| 2517|Drosophila melanogaster CG4252-PA
            protein.
          Length = 2517

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 153  PPAALRLAYVILHIFVNLSTEILMQLALVLCNIHLCPTNYMEIY 284
            PP  +   Y  +H F+NL  ++L+  A   C  +    +Y+E Y
Sbjct: 1487 PPETIDSNYRKIHEFLNLIPKLLVSRASYNCGEYARALSYLESY 1530


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,165,053
Number of Sequences: 53049
Number of extensions: 253064
Number of successful extensions: 451
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)