Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2a05
         (435 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       25   1.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   4.7  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     23   6.2  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    22   8.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   8.2  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 201 SLVNFPTTPTAVKPPRVGPKTS 136
           SLVN  T  T   PP V P TS
Sbjct: 397 SLVNGGTPSTTTMPPSVAPTTS 418


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +3

Query: 9   DWGLQLSPINEEFLVSASHK 68
           D GL+++P   EF++ +SH+
Sbjct: 670 DNGLKIAPTKTEFIMVSSHQ 689


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 6   GDWGLQLSPINEEFLV 53
           G  G+QLSP+NE  ++
Sbjct: 58  GYGGVQLSPVNENIVI 73


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 177 PTAVKPPRVGPKTSLNHSI 121
           PT  KP  +GP TS++ ++
Sbjct: 252 PTQAKPEILGPATSMSAAL 270


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 146  GPTRGGFTAVGVVGKLTKL 202
            G   GGF  VG+ G +T L
Sbjct: 2729 GAIVGGFAPVGIAGSITFL 2747


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,020
Number of Sequences: 2352
Number of extensions: 8755
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)