Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2a05
         (435 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061159-1|AAL28707.1|  129|Drosophila melanogaster LD12764p pro...    29   2.7  
BT010293-1|AAQ23611.1| 1103|Drosophila melanogaster LD19434p pro...    27   8.3  
AY122161-1|AAM52673.1|  576|Drosophila melanogaster LD22376p pro...    27   8.3  
AE014298-692|AAF45996.1|  576|Drosophila melanogaster CG6903-PA ...    27   8.3  
AE014296-3549|AAF51732.2| 1103|Drosophila melanogaster CG33214-P...    27   8.3  
AE013599-3434|AAO41343.1|  272|Drosophila melanogaster CG30217-P...    27   8.3  

>AY061159-1|AAL28707.1|  129|Drosophila melanogaster LD12764p
           protein.
          Length = 129

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 259 GSLTCVVLCVICKYFIYLFIYIYACIHSIVL 351
           G   C + C  C   I ++IYIY CI  +VL
Sbjct: 56  GGSRCSIGCT-CYMCISIYIYIYICIRQLVL 85


>BT010293-1|AAQ23611.1| 1103|Drosophila melanogaster LD19434p
           protein.
          Length = 1103

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 365 YPISHALARVCRDDIE 412
           Y +SH LA+ C+DDI+
Sbjct: 273 YRVSHGLAKACKDDIK 288


>AY122161-1|AAM52673.1|  576|Drosophila melanogaster LD22376p
           protein.
          Length = 576

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 30  PINEEFLVSASHKLALITSLPFVHTARRYYRLNDLVRSSD 149
           PIN  F+       AL+ +L  V  A RYYR ++   ++D
Sbjct: 132 PINYAFIAVFVLVAALLIALKLVSCAWRYYRYDEATAAAD 171


>AE014298-692|AAF45996.1|  576|Drosophila melanogaster CG6903-PA
           protein.
          Length = 576

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 30  PINEEFLVSASHKLALITSLPFVHTARRYYRLNDLVRSSD 149
           PIN  F+       AL+ +L  V  A RYYR ++   ++D
Sbjct: 132 PINYAFIAVFVLVAALLIALKLVSCAWRYYRYDEATAAAD 171


>AE014296-3549|AAF51732.2| 1103|Drosophila melanogaster CG33214-PA
           protein.
          Length = 1103

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 365 YPISHALARVCRDDIE 412
           Y +SH LA+ C+DDI+
Sbjct: 273 YRVSHGLAKACKDDIK 288


>AE013599-3434|AAO41343.1|  272|Drosophila melanogaster CG30217-PB,
           isoform B protein.
          Length = 272

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +1

Query: 253 AEGSLTCVVLCVICKYFIYLFIYIYACIHS 342
           A G L+C++  + C + I+   ++Y+C+ S
Sbjct: 220 ALGQLSCLLSTLSCCFPIFALTFVYSCLQS 249


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,856,950
Number of Sequences: 53049
Number of extensions: 369044
Number of successful extensions: 1032
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)