Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29p20
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87442-1|BAA13383.1| 708|Homo sapiens KIAA0253 protein. 73 6e-13
BC047621-1|AAH47621.1| 689|Homo sapiens NCSTN protein protein. 73 6e-13
AY359120-1|AAQ89478.1| 709|Homo sapiens ATAG1874 protein. 73 6e-13
AL445230-7|CAI15010.1| 689|Homo sapiens nicastrin protein. 73 6e-13
AL445230-6|CAI15009.1| 709|Homo sapiens nicastrin protein. 73 6e-13
AL445230-5|CAI15008.1| 255|Homo sapiens nicastrin protein. 73 6e-13
AF240468-1|AAG11412.1| 709|Homo sapiens nicastrin protein. 73 6e-13
AL445230-4|CAI15007.1| 232|Homo sapiens nicastrin protein. 73 9e-13
AL445230-3|CAI15006.1| 134|Homo sapiens nicastrin protein. 62 1e-09
>D87442-1|BAA13383.1| 708|Homo sapiens KIAA0253 protein.
Length = 708
Score = 73.3 bits (172), Expect = 6e-13
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +3
Query: 231 LLVTIILL--IFKGYSCERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFV 404
LL +LL + +G S ER IY + +A C R LN THQ GC +S G GV+H V
Sbjct: 19 LLSFCVLLAGLCRGNSVERK---IYIPLNKTAPCVRLLNATHQIGCQSSISGDTGVIHVV 75
Query: 405 QDHDDVLWLATNASAGPYMAVVSTSKF--GLVEFLIDHPTNIAGVLTYENASDIPSFFTH 578
+ +D+ W+ T+ PYM ++ + F L+E L + IAG+ S F+
Sbjct: 76 EKEEDLQWVLTDGPNPPYMVLLESKHFTRDLMEKLKGRTSRIAGLAVSLTKPSPASGFSP 135
Query: 579 DTRCPNE 599
+CPN+
Sbjct: 136 SVQCPND 142
>BC047621-1|AAH47621.1| 689|Homo sapiens NCSTN protein protein.
Length = 689
Score = 73.3 bits (172), Expect = 6e-13
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +3
Query: 243 IILLIFKGYSCERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFVQDHDDV 422
I+ + +G S ER IY + +A C R LN THQ GC +S G GV+H V+ +D+
Sbjct: 6 ILESLCRGNSVERK---IYIPLNKTAPCVRLLNATHQIGCQSSISGDTGVIHVVEKEEDL 62
Query: 423 LWLATNASAGPYMAVVSTSKF--GLVEFLIDHPTNIAGVLTYENASDIPSFFTHDTRCPN 596
W+ T+ PYM ++ + F L+E L + IAG+ S F+ +CPN
Sbjct: 63 QWVLTDGPNPPYMVLLESKHFTRDLMEKLKGRTSRIAGLAVSLTKPSPASGFSPSVQCPN 122
Query: 597 E 599
+
Sbjct: 123 D 123
>AY359120-1|AAQ89478.1| 709|Homo sapiens ATAG1874 protein.
Length = 709
Score = 73.3 bits (172), Expect = 6e-13
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +3
Query: 231 LLVTIILL--IFKGYSCERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFV 404
LL +LL + +G S ER IY + +A C R LN THQ GC +S G GV+H V
Sbjct: 20 LLSFCVLLAGLCRGNSVERK---IYIPLNKTAPCVRLLNATHQIGCQSSISGDTGVIHVV 76
Query: 405 QDHDDVLWLATNASAGPYMAVVSTSKF--GLVEFLIDHPTNIAGVLTYENASDIPSFFTH 578
+ +D+ W+ T+ PYM ++ + F L+E L + IAG+ S F+
Sbjct: 77 EKEEDLQWVLTDGPNPPYMVLLESKHFTRDLMEKLKGRTSRIAGLAVSLTKPSPASGFSP 136
Query: 579 DTRCPNE 599
+CPN+
Sbjct: 137 SVQCPND 143
>AL445230-7|CAI15010.1| 689|Homo sapiens nicastrin protein.
Length = 689
Score = 73.3 bits (172), Expect = 6e-13
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +3
Query: 243 IILLIFKGYSCERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFVQDHDDV 422
I+ + +G S ER IY + +A C R LN THQ GC +S G GV+H V+ +D+
Sbjct: 6 ILESLCRGNSVERK---IYIPLNKTAPCVRLLNATHQIGCQSSISGDTGVIHVVEKEEDL 62
Query: 423 LWLATNASAGPYMAVVSTSKF--GLVEFLIDHPTNIAGVLTYENASDIPSFFTHDTRCPN 596
W+ T+ PYM ++ + F L+E L + IAG+ S F+ +CPN
Sbjct: 63 QWVLTDGPNPPYMVLLESKHFTRDLMEKLKGRTSRIAGLAVSLTKPSPASGFSPSVQCPN 122
Query: 597 E 599
+
Sbjct: 123 D 123
>AL445230-6|CAI15009.1| 709|Homo sapiens nicastrin protein.
Length = 709
Score = 73.3 bits (172), Expect = 6e-13
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +3
Query: 231 LLVTIILL--IFKGYSCERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFV 404
LL +LL + +G S ER IY + +A C R LN THQ GC +S G GV+H V
Sbjct: 20 LLSFCVLLAGLCRGNSVERK---IYIPLNKTAPCVRLLNATHQIGCQSSISGDTGVIHVV 76
Query: 405 QDHDDVLWLATNASAGPYMAVVSTSKF--GLVEFLIDHPTNIAGVLTYENASDIPSFFTH 578
+ +D+ W+ T+ PYM ++ + F L+E L + IAG+ S F+
Sbjct: 77 EKEEDLQWVLTDGPNPPYMVLLESKHFTRDLMEKLKGRTSRIAGLAVSLTKPSPASGFSP 136
Query: 579 DTRCPNE 599
+CPN+
Sbjct: 137 SVQCPND 143
>AL445230-5|CAI15008.1| 255|Homo sapiens nicastrin protein.
Length = 255
Score = 73.3 bits (172), Expect = 6e-13
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +3
Query: 231 LLVTIILL--IFKGYSCERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFV 404
LL +LL + +G S ER IY + +A C R LN THQ GC +S G GV+H V
Sbjct: 20 LLSFCVLLAGLCRGNSVERK---IYIPLNKTAPCVRLLNATHQIGCQSSISGDTGVIHVV 76
Query: 405 QDHDDVLWLATNASAGPYMAVVSTSKF--GLVEFLIDHPTNIAGVLTYENASDIPSFFTH 578
+ +D+ W+ T+ PYM ++ + F L+E L + IAG+ S F+
Sbjct: 77 EKEEDLQWVLTDGPNPPYMVLLESKHFTRDLMEKLKGRTSRIAGLAVSLTKPSPASGFSP 136
Query: 579 DTRCPNE 599
+CPN+
Sbjct: 137 SVQCPND 143
>AF240468-1|AAG11412.1| 709|Homo sapiens nicastrin protein.
Length = 709
Score = 73.3 bits (172), Expect = 6e-13
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +3
Query: 231 LLVTIILL--IFKGYSCERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFV 404
LL +LL + +G S ER IY + +A C R LN THQ GC +S G GV+H V
Sbjct: 20 LLSFCVLLAGLCRGNSVERK---IYIPLNKTAPCVRLLNATHQIGCQSSISGDTGVIHVV 76
Query: 405 QDHDDVLWLATNASAGPYMAVVSTSKF--GLVEFLIDHPTNIAGVLTYENASDIPSFFTH 578
+ +D+ W+ T+ PYM ++ + F L+E L + IAG+ S F+
Sbjct: 77 EKEEDLQWVLTDGPNPPYMVLLESKHFTRDLMEKLKGRTSRIAGLAVSLTKPSPASGFSP 136
Query: 579 DTRCPNE 599
+CPN+
Sbjct: 137 SVQCPND 143
>AL445230-4|CAI15007.1| 232|Homo sapiens nicastrin protein.
Length = 232
Score = 72.9 bits (171), Expect = 9e-13
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Frame = +3
Query: 261 KGYSCERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFVQDHDDVLWLATN 440
+G S ER IY + +A C R LN THQ GC +S G GV+H V+ +D+ W+ T+
Sbjct: 65 RGNSVERK---IYIPLNKTAPCVRLLNATHQIGCQSSISGDTGVIHVVEKEEDLQWVLTD 121
Query: 441 ASAGPYMAVVSTSKF--GLVEFLIDHPTNIAGVLTYENASDIPSFFTHDTRCPNE 599
PYM ++ + F L+E L + IAG+ S F+ +CPN+
Sbjct: 122 GPNPPYMVLLESKHFTRDLMEKLKGRTSRIAGLAVSLTKPSPASGFSPSVQCPND 176
>AL445230-3|CAI15006.1| 134|Homo sapiens nicastrin protein.
Length = 134
Score = 62.5 bits (145), Expect = 1e-09
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +3
Query: 231 LLVTIILL--IFKGYSCERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFV 404
LL +LL + +G S ER IY + +A C R LN THQ GC +S G GV+H V
Sbjct: 20 LLSFCVLLAGLCRGNSVERK---IYIPLNKTAPCVRLLNATHQIGCQSSISGDTGVIHVV 76
Query: 405 QDHDDVLWLATNASAGPYMAVVSTSKF 485
+ +D+ W+ T+ PYM ++ + F
Sbjct: 77 EKEEDLQWVLTDGPNPPYMVLLESKHF 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,557,043
Number of Sequences: 237096
Number of extensions: 1650488
Number of successful extensions: 2693
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2685
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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