Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29p20
(635 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003245-1|AAO25002.1| 709|Drosophila melanogaster LD36812p pro... 81 9e-16
AF240470-1|AAG11414.1| 695|Drosophila melanogaster nicastrin pr... 81 9e-16
AE014297-3646|AAF56349.2| 695|Drosophila melanogaster CG7012-PA... 81 9e-16
AE014297-3647|AAS65213.1| 665|Drosophila melanogaster CG7012-PB... 78 1e-14
BT001428-1|AAN71183.1| 920|Drosophila melanogaster GH16009p pro... 29 7.0
AY069747-1|AAL39892.1| 1132|Drosophila melanogaster LP08646p pro... 29 7.0
AY051503-1|AAK92927.1| 2028|Drosophila melanogaster GH15471p pro... 29 7.0
AE014297-2148|AAN13696.2| 920|Drosophila melanogaster CG31045-P... 29 7.0
AE014297-2147|ABI31172.1| 1923|Drosophila melanogaster CG31045-P... 29 7.0
AE014297-2146|ABI31171.1| 2160|Drosophila melanogaster CG31045-P... 29 7.0
AE014297-2145|AAN13695.2| 2194|Drosophila melanogaster CG31045-P... 29 7.0
AE014297-2144|AAN13697.1| 1134|Drosophila melanogaster CG31045-P... 29 7.0
AE014297-2143|AAF55271.3| 2148|Drosophila melanogaster CG31045-P... 29 7.0
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 28 9.2
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 28 9.2
>BT003245-1|AAO25002.1| 709|Drosophila melanogaster LD36812p
protein.
Length = 709
Score = 81.4 bits (192), Expect = 9e-16
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = +3
Query: 276 ERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFVQDHDDVLWLATNASAGP 455
ER + +Y I G A+CFRRLNGTHQTGCS++ G+VGV+H + D+ +L ++ + P
Sbjct: 39 ERTRDKMYEPI-GGASCFRRLNGTHQTGCSSTYSGSVGVLHLINVEADLEFLLSSPPSPP 97
Query: 456 YMAVVSTSKF---GLVEFLIDHPTNIAGVLTYENASDIPSFFTHDTRCPNEFS 605
Y ++ F L+ P NI+ VL + + F+H+ CPN++S
Sbjct: 98 YAPMIPPHLFTRNNLMRLKEAGPKNISVVLLINRTNQMKQ-FSHELNCPNQYS 149
>AF240470-1|AAG11414.1| 695|Drosophila melanogaster nicastrin
protein.
Length = 695
Score = 81.4 bits (192), Expect = 9e-16
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = +3
Query: 276 ERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFVQDHDDVLWLATNASAGP 455
ER + +Y I G A+CFRRLNGTHQTGCS++ G+VGV+H + D+ +L ++ + P
Sbjct: 25 ERTRDKMYEPI-GGASCFRRLNGTHQTGCSSTYSGSVGVLHLINVEADLEFLLSSPPSPP 83
Query: 456 YMAVVSTSKF---GLVEFLIDHPTNIAGVLTYENASDIPSFFTHDTRCPNEFS 605
Y ++ F L+ P NI+ VL + + F+H+ CPN++S
Sbjct: 84 YAPMIPPHLFTRNNLMRLKEAGPKNISVVLLINRTNQMKQ-FSHELNCPNQYS 135
>AE014297-3646|AAF56349.2| 695|Drosophila melanogaster CG7012-PA,
isoform A protein.
Length = 695
Score = 81.4 bits (192), Expect = 9e-16
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = +3
Query: 276 ERLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFVQDHDDVLWLATNASAGP 455
ER + +Y I G A+CFRRLNGTHQTGCS++ G+VGV+H + D+ +L ++ + P
Sbjct: 25 ERTRDKMYEPI-GGASCFRRLNGTHQTGCSSTYSGSVGVLHLINVEADLEFLLSSPPSPP 83
Query: 456 YMAVVSTSKF---GLVEFLIDHPTNIAGVLTYENASDIPSFFTHDTRCPNEFS 605
Y ++ F L+ P NI+ VL + + F+H+ CPN++S
Sbjct: 84 YAPMIPPHLFTRNNLMRLKEAGPKNISVVLLINRTNQMKQ-FSHELNCPNQYS 135
>AE014297-3647|AAS65213.1| 665|Drosophila melanogaster CG7012-PB,
isoform B protein.
Length = 665
Score = 77.8 bits (183), Expect = 1e-14
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Frame = +3
Query: 312 GSAACFRRLNGTHQTGCSTSDKGAVGVVHFVQDHDDVLWLATNASAGPYMAVVSTSKF-- 485
G A+CFRRLNGTHQTGCS++ G+VGV+H + D+ +L ++ + PY ++ F
Sbjct: 6 GGASCFRRLNGTHQTGCSSTYSGSVGVLHLINVEADLEFLLSSPPSPPYAPMIPPHLFTR 65
Query: 486 -GLVEFLIDHPTNIAGVLTYENASDIPSFFTHDTRCPNEFS 605
L+ P NI+ VL + + F+H+ CPN++S
Sbjct: 66 NNLMRLKEAGPKNISVVLLINRTNQMKQ-FSHELNCPNQYS 105
>BT001428-1|AAN71183.1| 920|Drosophila melanogaster GH16009p
protein.
Length = 920
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 426 TKHHHDLEQNVQLQLHLYLM*SNQFD 349
T+H HDLEQ V L+ HL + S+ ++
Sbjct: 286 TQHEHDLEQLVALKKHLEMKLSDAYE 311
>AY069747-1|AAL39892.1| 1132|Drosophila melanogaster LP08646p
protein.
Length = 1132
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 426 TKHHHDLEQNVQLQLHLYLM*SNQFD 349
T+H HDLEQ V L+ HL + S+ ++
Sbjct: 512 TQHEHDLEQLVALKKHLEMKLSDAYE 537
>AY051503-1|AAK92927.1| 2028|Drosophila melanogaster GH15471p protein.
Length = 2028
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 426 TKHHHDLEQNVQLQLHLYLM*SNQFD 349
T+H HDLEQ V L+ HL + S+ ++
Sbjct: 1406 TQHEHDLEQLVALKKHLEMKLSDAYE 1431
>AE014297-2148|AAN13696.2| 920|Drosophila melanogaster CG31045-PC,
isoform C protein.
Length = 920
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 426 TKHHHDLEQNVQLQLHLYLM*SNQFD 349
T+H HDLEQ V L+ HL + S+ ++
Sbjct: 286 TQHEHDLEQLVALKKHLEMKLSDAYE 311
>AE014297-2147|ABI31172.1| 1923|Drosophila melanogaster CG31045-PF,
isoform F protein.
Length = 1923
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 426 TKHHHDLEQNVQLQLHLYLM*SNQFD 349
T+H HDLEQ V L+ HL + S+ ++
Sbjct: 1289 TQHEHDLEQLVALKKHLEMKLSDAYE 1314
>AE014297-2146|ABI31171.1| 2160|Drosophila melanogaster CG31045-PG,
isoform G protein.
Length = 2160
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 426 TKHHHDLEQNVQLQLHLYLM*SNQFD 349
T+H HDLEQ V L+ HL + S+ ++
Sbjct: 1526 TQHEHDLEQLVALKKHLEMKLSDAYE 1551
>AE014297-2145|AAN13695.2| 2194|Drosophila melanogaster CG31045-PB,
isoform B protein.
Length = 2194
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 426 TKHHHDLEQNVQLQLHLYLM*SNQFD 349
T+H HDLEQ V L+ HL + S+ ++
Sbjct: 1526 TQHEHDLEQLVALKKHLEMKLSDAYE 1551
>AE014297-2144|AAN13697.1| 1134|Drosophila melanogaster CG31045-PD,
isoform D protein.
Length = 1134
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 426 TKHHHDLEQNVQLQLHLYLM*SNQFD 349
T+H HDLEQ V L+ HL + S+ ++
Sbjct: 512 TQHEHDLEQLVALKKHLEMKLSDAYE 537
>AE014297-2143|AAF55271.3| 2148|Drosophila melanogaster CG31045-PA,
isoform A protein.
Length = 2148
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 426 TKHHHDLEQNVQLQLHLYLM*SNQFD 349
T+H HDLEQ V L+ HL + S+ ++
Sbjct: 1526 TQHEHDLEQLVALKKHLEMKLSDAYE 1551
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +3
Query: 252 LIFKGYSCE---RLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFVQDHDDV 422
L+++GYS + + S +C R C ++ V HF Q++DD
Sbjct: 1534 LLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCDITN-----VCHFAQNNDDS 1588
Query: 423 LWLAT 437
LWL+T
Sbjct: 1589 LWLST 1593
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +3
Query: 252 LIFKGYSCE---RLHELIYSSIEGSAACFRRLNGTHQTGCSTSDKGAVGVVHFVQDHDDV 422
L+++GYS + + S +C R C ++ V HF Q++DD
Sbjct: 1536 LLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCDITN-----VCHFAQNNDDS 1590
Query: 423 LWLAT 437
LWL+T
Sbjct: 1591 LWLST 1595
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,779,764
Number of Sequences: 53049
Number of extensions: 530615
Number of successful extensions: 1033
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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