Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29p17
(291 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36... 44 2e-05
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 44 2e-05
03_01_0227 - 1797353-1798519 43 5e-05
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753... 40 4e-04
10_05_0046 + 8516043-8516425,8517908-8518019,8518276-8518377,851... 34 0.022
11_03_0201 + 11578163-11578915 30 0.36
05_01_0291 - 2274587-2274676,2274871-2275076,2275638-2275719,227... 30 0.36
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 29 0.47
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 29 0.63
10_02_0198 - 6611775-6612611 28 1.1
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 28 1.4
10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834 28 1.4
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 28 1.4
12_02_0637 - 21437244-21438080 27 1.9
08_02_0235 + 14627648-14628889 27 1.9
07_01_1086 - 9930311-9931993 27 1.9
10_01_0300 - 3257584-3258825 27 2.5
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 27 2.5
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 27 2.5
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 27 2.5
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 27 3.3
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 27 3.3
09_02_0555 - 10588685-10592038 27 3.3
06_02_0319 + 14306464-14306577,14306623-14307117 27 3.3
03_02_1029 - 13488535-13493037 27 3.3
08_01_0749 + 7063297-7064370 26 4.4
06_03_0557 + 22133604-22134506 26 4.4
12_02_0214 + 15750620-15751273 26 5.8
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476 25 7.7
04_01_0458 - 5939496-5939929,5940071-5940141,5940319-5940635 25 7.7
03_06_0464 + 34126930-34127065,34127149-34127333,34127444-341276... 25 7.7
>10_01_0028 -
359988-359996,360228-360332,360415-360536,360676-360763,
360988-361056,361132-361461,361544-361610,361695-361753,
361838-362056,362224-362289,362370-362500,362683-362782,
362864-363001,363111-363218,363627-363723,363806-364257
Length = 719
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +2
Query: 182 IQYLLKWKGYKEEESTWEPVENL-DCEELIKTFEEK 286
+ + ++WKGY EE TWEP+ENL DC IK F ++
Sbjct: 434 LYFKVQWKGYGREEDTWEPIENLRDCPLKIKEFVQE 469
>03_02_0234 +
6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 44.0 bits (99), Expect = 2e-05
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 167 TVKGKIQYLLKWKGYKEEESTWEPVENL-DCEELIKTFEEK 286
T K + + ++WKGY TWEP++ L DC E IK F EK
Sbjct: 574 TGKNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEK 614
>03_01_0227 - 1797353-1798519
Length = 388
Score = 42.7 bits (96), Expect = 5e-05
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +2
Query: 155 LNKRTV---KGKIQYLLKWKGYKEEESTWEPVENLDCEELIKTFEEKK 289
+NKR +GK +YL+KW EE+TWEP EN+D EL++ FE+++
Sbjct: 327 VNKREAAEGEGKWEYLVKWVDI--EEATWEPAENVDA-ELLQEFEQRQ 371
>05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,
7535889-7535932,7536042-7536146,7536223-7536344,
7536807-7536894,7536966-7537052,7537718-7537786,
7537859-7538188,7539777-7539824,7540003-7540069,
7540150-7540208,7541220-7541453,7541536-7541601,
7541684-7541883,7542104-7542197,7542295-7542414,
7542596-7542703,7542808-7542871,7543378-7543409,
7546049-7548007
Length = 1407
Score = 39.5 bits (88), Expect = 4e-04
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 KGKIQYLLKWKGYKEEESTWEPVENL-DCEELIKTF 277
K + + ++WKGY TWEPVE L +C+E I+ F
Sbjct: 953 KHGLYFKVRWKGYGPHHDTWEPVEGLRNCKEAIRDF 988
>10_05_0046 +
8516043-8516425,8517908-8518019,8518276-8518377,
8518605-8518657,8518976-8519062,8519162-8519830,
8520154-8520214,8520295-8520342
Length = 504
Score = 33.9 bits (74), Expect = 0.022
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 203 KGYKEEESTWEPVENLD-CEELIKTFE 280
+G+ E +TWEP+ENL C ++I FE
Sbjct: 218 RGWPESANTWEPLENLSACSDIIDAFE 244
Score = 28.7 bits (61), Expect = 0.83
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 161 KRTVKGKIQYLLKWKGYKEEESTWE 235
+R KGK+QYL+KW G + E W+
Sbjct: 115 RRLRKGKLQYLVKW-GSQWEGGAWD 138
>11_03_0201 + 11578163-11578915
Length = 250
Score = 29.9 bits (64), Expect = 0.36
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 158 NKRTVKGKIQ--YLLKWKGYKEEESTWEPVENL 250
N+R + K+ Y ++W + EEE+TWE + L
Sbjct: 198 NERRTRNKVTRFYRVQWSHHSEEEATWEREDEL 230
>05_01_0291 -
2274587-2274676,2274871-2275076,2275638-2275719,
2275948-2276064,2276489-2276751,2277548-2277620,
2278324-2278427,2278613-2278706
Length = 342
Score = 29.9 bits (64), Expect = 0.36
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 167 TVKGKIQYLLKWKGYKEEESTWEPV 241
T G QYLL++ Y +EE TW V
Sbjct: 73 TETGSFQYLLEYLDYPDEEKTWTEV 97
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 29.5 bits (63), Expect = 0.47
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 185 QYLLKWKGYKEEESTWEP 238
++L+KWKG E+TWEP
Sbjct: 473 EFLVKWKGLDYCEATWEP 490
>07_03_1567 -
27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 29.1 bits (62), Expect = 0.63
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 185 QYLLKWKGYKEEESTWE 235
+YL+KW+G ESTWE
Sbjct: 526 EYLVKWQGLPYAESTWE 542
>10_02_0198 - 6611775-6612611
Length = 278
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 155 LNKRTVKGKIQYLLK--WKGYKEEESTWEPVENL 250
+++R + ++ + K W + EEESTWE + L
Sbjct: 225 IDERRTRNRVIHFCKVQWSNHSEEESTWEREDEL 258
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 158 NKRTVKGKIQYLLK--WKGYKEEESTWEPVENL 250
N+R + ++ K W + EEESTWE + L
Sbjct: 529 NERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 561
>10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834
Length = 324
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 158 NKRTVKGKIQYLLK--WKGYKEEESTWEPVENL 250
N+R + ++ K W + EEESTWE + L
Sbjct: 272 NERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 304
>04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 158 NKRTVKGKIQYLLK--WKGYKEEESTWEPVENL 250
N+R + ++ K W + EEESTWE + L
Sbjct: 1236 NERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 1268
>12_02_0637 - 21437244-21438080
Length = 278
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 161 KRTVKGKIQYL-LKWKGYKEEESTWEPVENL 250
+RT I++ ++W + EEESTWE + L
Sbjct: 228 RRTRNRVIRFCKVQWSNHSEEESTWEREDEL 258
>08_02_0235 + 14627648-14628889
Length = 413
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 161 KRTVKGKIQYL-LKWKGYKEEESTWEPVENL 250
+RT I++ ++W + EEESTWE + L
Sbjct: 363 RRTRNRVIRFCKVQWSNHSEEESTWEREDEL 393
>07_01_1086 - 9930311-9931993
Length = 560
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 161 KRTVKGKIQYL-LKWKGYKEEESTWEPVENL 250
+RT I++ ++W + EEESTWE + L
Sbjct: 510 RRTRNRVIRFCKVQWSNHSEEESTWEREDEL 540
>10_01_0300 - 3257584-3258825
Length = 413
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 194 LKWKGYKEEESTWEPVENL 250
++W + EEESTWE + L
Sbjct: 375 VQWSNHSEEESTWEREDEL 393
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 194 LKWKGYKEEESTWEPVENL 250
++W + EEESTWE + L
Sbjct: 1638 VQWSNHSEEESTWEREDEL 1656
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 161 KRTVKGKIQYLLKWKGYKEEESTWE 235
+++ G+ +Y +KWK +E TWE
Sbjct: 160 RKSSTGEREYYVKWKELTYDECTWE 184
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +2
Query: 170 VKGKIQYLLKWKGYKEEESTWEPVENLDCEELIKTFEEKK 289
+K ++ L+ GYK+ W P+ ++ E L+ T + +
Sbjct: 397 IKSQLGAFLRSCGYKDSAVAWVPISAMENENLMTTASDTR 436
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 158 NKRTVKGKIQYLLK--WKGYKEEESTWEPVENL 250
+KR + K+ K W + EEE+TWE + L
Sbjct: 521 SKRRTRNKVIRFCKVQWSHHSEEEATWEREDEL 553
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 LNKRTVKGKIQYL-LKWKGYKEEESTWEPVENL 250
+ +RT I++ ++W + EEE+TWE + L
Sbjct: 622 MERRTRNRVIRFCKVQWSNHAEEEATWEREDEL 654
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 LNKRTVKGKIQYL-LKWKGYKEEESTWEPVENL 250
+ +RT I++ ++W + EEE+TWE + L
Sbjct: 1065 MERRTRNRVIRFCKVQWSNHAEEEATWEREDEL 1097
>06_02_0319 + 14306464-14306577,14306623-14307117
Length = 202
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 LNKRTVKGKIQYL-LKWKGYKEEESTWEPVENL 250
+ +RT I++ ++W + EEE+TWE + L
Sbjct: 150 IERRTRNRVIRFCKVQWSNHAEEEATWEREDEL 182
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 LNKRTVKGKIQYL-LKWKGYKEEESTWEPVENL 250
+ +RT I++ ++W + EEE+TWE + L
Sbjct: 1448 MERRTRNRVIRFCKVQWSNHAEEEATWEREDEL 1480
>08_01_0749 + 7063297-7064370
Length = 357
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 155 LNKRTVKGKIQYLLK--WKGYKEEESTWEPVENL 250
+++R + ++ K W + EEE+TWE + L
Sbjct: 304 VSERNTRNRVTRFCKVQWSNHSEEEATWEREDEL 337
>06_03_0557 + 22133604-22134506
Length = 300
Score = 26.2 bits (55), Expect = 4.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 188 YLLKWKGYKEEESTWEPVENLDCE 259
Y ++W + E+E+TWE + L E
Sbjct: 271 YKVQWTNHSEDEATWEREDLLRAE 294
>12_02_0214 + 15750620-15751273
Length = 217
Score = 25.8 bits (54), Expect = 5.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 194 LKWKGYKEEESTWEPVENL 250
++W + EEE+TWE + L
Sbjct: 179 VQWSNHSEEEATWEREDEL 197
>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
Length = 676
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 37 NSRDFVKKCRSFLAQHG*KREENGDQ*SIERGRICRGESS 156
+SR+F+++ + R+E D S+ +GR RGE S
Sbjct: 261 SSREFMERSPRRAGEAENDRKEGADAASVSKGRPSRGELS 300
>04_01_0458 - 5939496-5939929,5940071-5940141,5940319-5940635
Length = 273
Score = 25.4 bits (53), Expect = 7.7
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 173 KGKIQY-LLKWKGYKEEESTWEPVENL 250
K + Y L+KW G E +TWE + L
Sbjct: 232 KATVPYVLIKWTGMPTELATWENLRQL 258
>03_06_0464 +
34126930-34127065,34127149-34127333,34127444-34127632,
34128309-34128471,34129046-34129232,34129467-34129611
Length = 334
Score = 25.4 bits (53), Expect = 7.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 170 LYVC*ELSPRHILPRSMLHWSPFSS 96
LY S RH+ +S+ HWS F+S
Sbjct: 250 LYENPSASGRHLCVQSIAHWSDFAS 274
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,676,480
Number of Sequences: 37544
Number of extensions: 112397
Number of successful extensions: 318
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 316296968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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