Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29p13
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060828-1|AAL28376.1|  337|Drosophila melanogaster GM01318p pro...   204   1e-52
AE014296-2207|AAF49872.2|  427|Drosophila melanogaster CG11009-P...   204   1e-52
AE014297-3661|AAN14025.1|  477|Drosophila melanogaster CG31381-P...    31   1.1  

>AY060828-1|AAL28376.1|  337|Drosophila melanogaster GM01318p
           protein.
          Length = 337

 Score =  204 bits (497), Expect = 1e-52
 Identities = 94/138 (68%), Positives = 117/138 (84%)
 Frame = +3

Query: 138 MSLNTAHADHGVLIHAGECIILFSDNVSVEFYGNDTPEFKGIKEGRMYLTTHRMIYNSKK 317
           MS+NTAHA++GVLIHAGE I+L SD+VS+EF G D P FKG K GR+YLT+HRMI+NSKK
Sbjct: 1   MSVNTAHANNGVLIHAGEYILLHSDSVSMEFSGQDNPIFKGSKGGRIYLTSHRMIFNSKK 60

Query: 318 NTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNGNFIGEVKFKLTFKSGGAIEY 497
           ++D+M+SFS PF+AL DV +EQP+F AN IKGKVRAQPNGN++GEVKFKL FK+GGAIEY
Sbjct: 61  SSDSMQSFSAPFVALSDVEIEQPVFGANYIKGKVRAQPNGNYVGEVKFKLHFKAGGAIEY 120

Query: 498 GQAMLKAAHLASRHMAAG 551
           GQA+L++A  A  +   G
Sbjct: 121 GQALLRSAKTAMNNYHRG 138


>AE014296-2207|AAF49872.2|  427|Drosophila melanogaster CG11009-PA
           protein.
          Length = 427

 Score =  204 bits (497), Expect = 1e-52
 Identities = 94/138 (68%), Positives = 117/138 (84%)
 Frame = +3

Query: 138 MSLNTAHADHGVLIHAGECIILFSDNVSVEFYGNDTPEFKGIKEGRMYLTTHRMIYNSKK 317
           MS+NTAHA++GVLIHAGE I+L SD+VS+EF G D P FKG K GR+YLT+HRMI+NSKK
Sbjct: 1   MSVNTAHANNGVLIHAGEYILLHSDSVSMEFSGQDNPIFKGSKGGRIYLTSHRMIFNSKK 60

Query: 318 NTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNGNFIGEVKFKLTFKSGGAIEY 497
           ++D+M+SFS PF+AL DV +EQP+F AN IKGKVRAQPNGN++GEVKFKL FK+GGAIEY
Sbjct: 61  SSDSMQSFSAPFVALSDVEIEQPVFGANYIKGKVRAQPNGNYVGEVKFKLHFKAGGAIEY 120

Query: 498 GQAMLKAAHLASRHMAAG 551
           GQA+L++A  A  +   G
Sbjct: 121 GQALLRSAKTAMNNYHRG 138


>AE014297-3661|AAN14025.1|  477|Drosophila melanogaster CG31381-PA
           protein.
          Length = 477

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = -3

Query: 585 VQSVGYKEVAKHQLPYDEKQDEQLLTWL 502
           +Q++GYKE   + + YD++QDE++  +L
Sbjct: 259 LQTIGYKEFIPYLIKYDQQQDEKIEEYL 286


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,065,533
Number of Sequences: 53049
Number of extensions: 548056
Number of successful extensions: 1170
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)