Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29p12
(398 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 1.7
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 3.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 5.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 5.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 5.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 5.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 5.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 5.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 5.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 5.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 5.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 5.2
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 1.7
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +1
Query: 139 RYDXHRCAXRKLFKQANSKHVFDHFGCSNNYCFNNY 246
R + R K+ ++ + + ++ NNY NNY
Sbjct: 303 RKERERSKEPKIISSLSNNYKYSNYNNYNNYNNNNY 338
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 70 RFSNY*SPTRYNNN 111
++SNY + YNNN
Sbjct: 323 KYSNYNNYNNYNNN 336
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.4 bits (43), Expect = 3.9
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1
Query: 136 WRYDXHRC 159
W YD HRC
Sbjct: 176 WPYDTHRC 183
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/36 (22%), Positives = 16/36 (44%)
Frame = +1
Query: 139 RYDXHRCAXRKLFKQANSKHVFDHFGCSNNYCFNNY 246
R + RC K+ ++ + + ++ NN NY
Sbjct: 70 RTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/36 (22%), Positives = 16/36 (44%)
Frame = +1
Query: 139 RYDXHRCAXRKLFKQANSKHVFDHFGCSNNYCFNNY 246
R + RC K+ ++ + + ++ NN NY
Sbjct: 70 RTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/36 (22%), Positives = 16/36 (44%)
Frame = +1
Query: 139 RYDXHRCAXRKLFKQANSKHVFDHFGCSNNYCFNNY 246
R + RC K+ ++ + + ++ NN NY
Sbjct: 70 RTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/36 (22%), Positives = 16/36 (44%)
Frame = +1
Query: 139 RYDXHRCAXRKLFKQANSKHVFDHFGCSNNYCFNNY 246
R + RC K+ ++ + + ++ NN NY
Sbjct: 70 RTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/36 (22%), Positives = 16/36 (44%)
Frame = +1
Query: 139 RYDXHRCAXRKLFKQANSKHVFDHFGCSNNYCFNNY 246
R + RC K+ ++ + + ++ NN NY
Sbjct: 70 RTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/36 (22%), Positives = 16/36 (44%)
Frame = +1
Query: 139 RYDXHRCAXRKLFKQANSKHVFDHFGCSNNYCFNNY 246
R + RC K+ ++ + + ++ NN NY
Sbjct: 70 RTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/36 (22%), Positives = 16/36 (44%)
Frame = +1
Query: 139 RYDXHRCAXRKLFKQANSKHVFDHFGCSNNYCFNNY 246
R + RC K+ ++ + + ++ NN NY
Sbjct: 70 RTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 220 SNNYCFNNY 246
SNNY +NNY
Sbjct: 86 SNNYNYNNY 94
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 220 SNNYCFNNY 246
SNNY +NNY
Sbjct: 86 SNNYNYNNY 94
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 220 SNNYCFNNY 246
SNNY +NNY
Sbjct: 86 SNNYNYNNY 94
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 220 SNNYCFNNY 246
SNNY +NNY
Sbjct: 86 SNNYNYNNY 94
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 220 SNNYCFNNY 246
SNNY +NNY
Sbjct: 319 SNNYNYNNY 327
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 220 SNNYCFNNY 246
SNNY +NNY
Sbjct: 319 SNNYNYNNY 327
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 220 SNNYCFNNY 246
SNNY +NNY
Sbjct: 319 SNNYNYNNY 327
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 220 SNNYCFNNY 246
SNNY +NNY
Sbjct: 319 SNNYNYNNY 327
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 220 SNNYCFNNY 246
SNNY +NNY
Sbjct: 319 SNNYNYNNY 327
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 220 SNNYCFNNY 246
SNNY +NNY
Sbjct: 308 SNNYNYNNY 316
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,916
Number of Sequences: 438
Number of extensions: 1531
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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