Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29p05
         (653 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc...   274   9e-75
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc...   271   7e-74
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa...   259   3e-70
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas...   256   2e-69
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ...   242   3e-65
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas...   180   1e-46
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21...   174   1e-44
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch...   167   2e-42
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc...   165   4e-42
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch...   114   9e-27
SPCC1235.12c |mug146||meiotically upregulated gene Mug46|Schizos...    25   7.2  

>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
           Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score =  274 bits (671), Expect = 9e-75
 Identities = 120/172 (69%), Positives = 149/172 (86%)
 Frame = +2

Query: 137 NMSDTSDLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQF 316
           N +   D+DR IEQLK+CE + EA+V+ LC KARE+L +E+NVQ V +PVTVCGDIHGQF
Sbjct: 16  NDATLGDVDRWIEQLKKCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQF 75

Query: 317 YDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQ 496
           +DL ELFK+GGDVP+ NYLFMGD+VDRG++SVET  LL+A+K+RYP+RIT++RGNHESRQ
Sbjct: 76  HDLMELFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQ 135

Query: 497 ITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSI 652
           ITQVYGFYDECLRKYGS  VW++ T +FDY  L+A+I+ RIFC+HGGLSPSI
Sbjct: 136 ITQVYGFYDECLRKYGSANVWKHFTNLFDYFPLTALIEDRIFCLHGGLSPSI 187


>SPBC26H8.05c |||serine/threonine protein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 348

 Score =  271 bits (664), Expect = 7e-74
 Identities = 118/166 (71%), Positives = 140/166 (84%)
 Frame = +2

Query: 155 DLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKEL 334
           DLD Q+E+L+   +I E+ V  LC + R+IL+EESN+Q + SPVT+CGDIHGQ +DL EL
Sbjct: 5   DLDWQLEELENGRLIPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLEL 64

Query: 335 FKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 514
           F++GG  P T YLF+GDFVDRGFYSVETFLLLL LK +YP  +TLIRGNHESRQITQVYG
Sbjct: 65  FRIGGSCPGTKYLFLGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYG 124

Query: 515 FYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSI 652
           FYDEC+RKYGS  VWRYC EIFDYLSL A++DG++FCVHGGLSPSI
Sbjct: 125 FYDECVRKYGSANVWRYCCEIFDYLSLGALVDGKVFCVHGGLSPSI 170


>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
           Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 309

 Score =  259 bits (634), Expect = 3e-70
 Identities = 114/166 (68%), Positives = 139/166 (83%)
 Frame = +2

Query: 155 DLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKEL 334
           ++DR IEQL RCE + E +V  +C  A+E+L  ESNVQ V  PVTVCGDIHGQF+DL EL
Sbjct: 9   EVDRWIEQLSRCEPLSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMEL 68

Query: 335 FKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 514
           F +GG  P+TNYLFMGD+VDRG++SVET  LL+A K+RYP RIT++RGNHESRQITQVYG
Sbjct: 69  FNIGGPSPDTNYLFMGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYG 128

Query: 515 FYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSI 652
           FYDECLRKYG+  VW+Y T++FDYL L+A+I+ RIFC+HGGLSPSI
Sbjct: 129 FYDECLRKYGNANVWQYFTDLFDYLPLTALIEDRIFCLHGGLSPSI 174


>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
           Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 305

 Score =  256 bits (628), Expect = 2e-69
 Identities = 107/166 (64%), Positives = 138/166 (83%)
 Frame = +2

Query: 155 DLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKEL 334
           DLD  I  +++C+ + E ++K LC   + IL+EESN+Q V +PVTVCGDIHGQFYDL EL
Sbjct: 3   DLDEWIATVRKCKYLPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLEL 62

Query: 335 FKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 514
           F+VGG++P TNY+FMGDFVDRG++S+ETF L + LK RYPD+ITL+RGNHESRQITQVYG
Sbjct: 63  FRVGGELPSTNYIFMGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYG 122

Query: 515 FYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSI 652
           FYDEC  KYG+  VW+YC ++FD+L+L+A+ID +I CVHGGLSP +
Sbjct: 123 FYDECQTKYGNANVWKYCCQVFDFLTLAAVIDNKILCVHGGLSPEV 168


>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 307

 Score =  242 bits (593), Expect = 3e-65
 Identities = 107/166 (64%), Positives = 135/166 (81%)
 Frame = +2

Query: 155 DLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKEL 334
           DLD  IE+L   ++I E+ +  LC+ A+E+L++ESNV R+ +P+TV GDIHGQF DL E+
Sbjct: 3   DLDNIIERLYEKQLIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIHGQFDDLLEI 62

Query: 335 FKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 514
           F++GG  P TNYLF+GD+VDRG+YS+ET  LL+ LK+RYP RITL+RGNHESR ITQ YG
Sbjct: 63  FRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHESRGITQTYG 122

Query: 515 FYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSI 652
           FY ECLRKYG+  VW+Y T+IFD+L+LSA ID  IFCVHGGLSPSI
Sbjct: 123 FYSECLRKYGNANVWKYFTDIFDFLTLSATIDDTIFCVHGGLSPSI 168


>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
           PP1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 327

 Score =  180 bits (439), Expect = 1e-46
 Identities = 77/152 (50%), Positives = 111/152 (73%)
 Frame = +2

Query: 197 IMEAEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLF 376
           + E E++ LC KAREI + +  +  +++P+ +CGDIHGQ+YDL  LF+ GG  PE NYLF
Sbjct: 29  LSEDEIRFLCNKAREIFISQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPEANYLF 88

Query: 377 MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITV 556
           +GD+VDRG  S+E   LLLA K++YP+   ++RGNHE   I ++YGFYDEC R+Y +I +
Sbjct: 89  LGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRY-NIKL 147

Query: 557 WRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSI 652
           W+  T+ F+ L ++AIID +IF +HGGLSP +
Sbjct: 148 WKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDL 179


>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
           Sds21|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 322

 Score =  174 bits (423), Expect = 1e-44
 Identities = 72/152 (47%), Positives = 109/152 (71%)
 Frame = +2

Query: 197 IMEAEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLF 376
           + +AE++ LC  +R I + +  +  +++P+ +CGDIHGQ+ DL  LF+ GG  P+ NYLF
Sbjct: 26  LSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDIHGQYSDLLRLFEYGGYPPDANYLF 85

Query: 377 MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITV 556
           +GD+VDRG  S+E   LL A K++YP+   L+RGNHE   I ++YGFYDEC R+Y SI +
Sbjct: 86  LGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYDECKRRY-SIKL 144

Query: 557 WRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSI 652
           W+  T+ F+ + ++A+ID +IFC+HGGLSP +
Sbjct: 145 WKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDL 176


>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
           Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 515

 Score =  167 bits (405), Expect = 2e-42
 Identities = 72/152 (47%), Positives = 105/152 (69%)
 Frame = +2

Query: 197 IMEAEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLF 376
           +  AE+ ++C   REI + +  +  +  PV + GD+HGQ+ DL  LF++ G  P +NYLF
Sbjct: 214 LKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDVHGQYSDLIRLFEMCGFPPSSNYLF 273

Query: 377 MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITV 556
           +GD+VDRG  S+ET LLL   K+RYP+   L+RGNHE   IT+VYGFYDEC R+  +I +
Sbjct: 274 LGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNHECANITRVYGFYDECKRRC-NIKI 332

Query: 557 WRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSI 652
           W+     F+ L +++++ G+IFCVHGGLSPS+
Sbjct: 333 WKTFINTFNCLPIASVVAGKIFCVHGGLSPSL 364


>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
           Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 554

 Score =  165 bits (402), Expect = 4e-42
 Identities = 81/172 (47%), Positives = 109/172 (63%)
 Frame = +2

Query: 137 NMSDTSDLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQF 316
           N  D  DL        R   + E +   +  KA EIL  E N+  VD+PVTVCGDIHGQ+
Sbjct: 65  NEPDKPDLHFLRNHFIREGRLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQY 124

Query: 317 YDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQ 496
           YDL +LF+VGG+   T YLF+GD+VDRG++S+E  L L ALK+ YP  + L+RGNHE   
Sbjct: 125 YDLMKLFEVGGNPANTQYLFLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAH 184

Query: 497 ITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSI 652
           +T  + F  EC  KY +I V+  C + F+ L L+AI++ +  CVHGGLSP +
Sbjct: 185 LTDYFTFKLECTHKY-NIKVYEACLQSFNALPLAAIMNKQFLCVHGGLSPEL 235


>SPBC3F6.01c |||serine/threonine protein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 473

 Score =  114 bits (275), Expect = 9e-27
 Identities = 56/123 (45%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
 Frame = +2

Query: 275 DSPVTVCGDIHGQFYDLKELFKVGGDVPETN-YLFMGDFVDRGFYSVETFLLLLALKVRY 451
           D  + +CGD HGQ++DL  +FK+ G    TN YLF GDFVDRG +S E    L A K+ Y
Sbjct: 209 DETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRGSWSTEVAFTLYAYKLLY 268

Query: 452 PDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVH 631
           PD + + RGNHE+  + +VYGF  EC  KY   T +   +E F  L L ++I      VH
Sbjct: 269 PDAVFINRGNHETDDMNKVYGFEGECRSKYNERT-FNIFSETFSLLPLGSLISDSYLVVH 327

Query: 632 GGL 640
           GGL
Sbjct: 328 GGL 330


>SPCC1235.12c |mug146||meiotically upregulated gene
           Mug46|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 311

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +2

Query: 203 EAEVKALCA-KAREILVEESNVQRVDSPVTVCGDIHGQFYDLKEL 334
           + ++ +LC     +I  + S++  +D+   VC D    F  LKEL
Sbjct: 181 QTDLTSLCMFNQNKIQTDWSSIDPMDNDKIVCADFEKNFNILKEL 225


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,709,928
Number of Sequences: 5004
Number of extensions: 55343
Number of successful extensions: 158
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)