Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29p01
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 167 8e-42
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 99 1e-21
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 99 1e-21
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 99 3e-21
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 73 2e-13
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 71 7e-13
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 61 6e-10
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 54 7e-08
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 54 7e-08
U23147-4|AAC46689.1| 464|Caenorhabditis elegans Hypothetical pr... 29 3.0
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 167 bits (405), Expect = 8e-42
Identities = 85/170 (50%), Positives = 104/170 (61%)
Frame = +1
Query: 154 VDITKNGDRGVLKRITREGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEFCLG 333
+DIT D GVLK I +EG+G P G V VHYVGTL +GTKFDSSRDR + F F LG
Sbjct: 6 IDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLG 65
Query: 334 KDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEMIDWRLEDL 513
+ VI+ W +GV TM KGEV T +Y YG +GSPPKIP ATL FE+E+ +W ED+
Sbjct: 66 RGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAEDI 125
Query: 514 SPTKNKGILRHILEAGTGLDSPNDGALVTVELEGRLQGDSKIFDQRTVTF 663
SP ++ ILR I+ G+ PND + V G QG F R V F
Sbjct: 126 SPDRDGTILRTIIVEGSKNSFPNDTSKVLAHCVGTYQGTE--FYNREVNF 173
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 99 bits (238), Expect = 1e-21
Identities = 50/104 (48%), Positives = 64/104 (61%)
Frame = +1
Query: 181 GVLKRITREGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWK 360
GV ++I EG+ P G V+ HYV TL +G K DSSRDR PF+F +GK VI+ W
Sbjct: 2 GVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWD 61
Query: 361 IGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEMI 492
GV M GE LT + + YG G PP+IP NATL FE+E++
Sbjct: 62 QGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 99 bits (238), Expect = 1e-21
Identities = 50/104 (48%), Positives = 64/104 (61%)
Frame = +1
Query: 181 GVLKRITREGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWK 360
GV ++I EG+ P G V+ HYV TL +G K DSSRDR PF+F +GK VI+ W
Sbjct: 2 GVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWD 61
Query: 361 IGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEMI 492
GV M GE LT + + YG G PP+IP NATL FE+E++
Sbjct: 62 QGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 98.7 bits (235), Expect = 3e-21
Identities = 45/87 (51%), Positives = 59/87 (67%)
Frame = +1
Query: 232 QGCHVSVHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCA 411
+G + +HY GTLLDGT+FDSSR RNE F F LG+ VI+ W G+ M GE ILT
Sbjct: 44 KGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTIP 103
Query: 412 PEYAYGASGSPPKIPPNATLQFEIEMI 492
P YG G+PPKIP N+ L+F++E++
Sbjct: 104 PHLGYGERGAPPKIPGNSVLKFDVELM 130
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/92 (42%), Positives = 50/92 (54%)
Frame = +1
Query: 181 GVLKRITREGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWK 360
GV ++I +G+ G V+ HYV L+DGTK DSSRDR PF+F +GK VI+ W
Sbjct: 198 GVDRQILVQGDNVTKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVIKGWD 257
Query: 361 IGVPTMKKGEVCILTCAPEYAYGASGSPPKIP 456
GV M E LT AP + + P IP
Sbjct: 258 QGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289
Score = 62.1 bits (144), Expect = 3e-10
Identities = 48/188 (25%), Positives = 79/188 (42%)
Frame = +1
Query: 88 RTFTNS*KRSDLKNKIMTVDQGVDITKNGDRGVLKRITREGEGNETPNQGCHVSVHYVGT 267
RTF + + L++ ++ + K G G+ ++ + G G P G V +
Sbjct: 54 RTFNHEGMKKHLRDHVVHKKSSCEHEKPGKTGIHHQVDKAGNG-VMPENGQLVQCYIEIK 112
Query: 268 LLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPP 447
L D S+ + P F +G VI IG+P MK GE+ + +Y YG +G
Sbjct: 113 LADCYTSWSNYESQNPIIFKIGFGEVIPGLDIGIPKMKVGEIATFHVSGKYGYGRAGFRG 172
Query: 448 KIPPNATLQFEIEMIDWRLEDLSPTKNKGILRHILEAGTGLDSPNDGALVTVELEGRLQG 627
IP NA+L ++ + + + + G+ R IL G + +G VT L
Sbjct: 173 LIPRNASLTCKVRLFNCSWDSYAKI---GVDRQILVQGDNVTKSKNGQTVTCHYVLILVD 229
Query: 628 DSKIFDQR 651
+KI R
Sbjct: 230 GTKIDSSR 237
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 70.9 bits (166), Expect = 7e-13
Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Frame = +1
Query: 175 DRGVLKRITREGEG-NETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIE 351
D GV IT E EG E G + Y L DG+ DSS RN PF F +G VI+
Sbjct: 145 DEGVHIHITHEVEGCTEKAQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIK 204
Query: 352 AWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEM 489
I + M +GE + PE AYG +G PP IP N+ L F++ +
Sbjct: 205 GMDIAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSL 250
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 61.3 bits (142), Expect = 6e-10
Identities = 36/83 (43%), Positives = 43/83 (51%)
Frame = +1
Query: 235 GCHVSVHYVGTLLDGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAP 414
G + YV L D T DSS RN PF F L VI+ I + M +GE +
Sbjct: 166 GDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDGMDIAMDGMCEGERRRVVIPS 225
Query: 415 EYAYGASGSPPKIPPNATLQFEI 483
EY YG+ GSPP+IP A L FEI
Sbjct: 226 EYGYGSQGSPPEIPGGARLFFEI 248
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 175 DRGVLKRITREGEGNETPNQGCHVSVH--YVGTLLDGTKFDSSRDRNEPFEFCLGKDGVI 348
D G++ T + + ++ ++H YV L DGT DSS RN PF F L + VI
Sbjct: 149 DEGIVIEQTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVI 208
Query: 349 EAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEM 489
+ I + M +GE + ++ YG G P IP A L F+I +
Sbjct: 209 KGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITL 255
Score = 31.1 bits (67), Expect = 0.74
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 274 DGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASG-SPPK 450
DG + S+ ++ +P+ F LGK VI + + M KGE + +G G
Sbjct: 63 DGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDN 121
Query: 451 IPPNATLQFEIEMID 495
I + TL + ++++D
Sbjct: 122 IKEDQTLYYTVQLVD 136
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 175 DRGVLKRITREGEGNETPNQGCHVSVH--YVGTLLDGTKFDSSRDRNEPFEFCLGKDGVI 348
D G++ T + + ++ ++H YV L DGT DSS RN PF F L + VI
Sbjct: 185 DEGIVIEQTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVI 244
Query: 349 EAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEM 489
+ I + M +GE + ++ YG G P IP A L F+I +
Sbjct: 245 KGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITL 291
Score = 31.1 bits (67), Expect = 0.74
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 274 DGTKFDSSRDRNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASG-SPPK 450
DG + S+ ++ +P+ F LGK VI + + M KGE + +G G
Sbjct: 99 DGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDN 157
Query: 451 IPPNATLQFEIEMID 495
I + TL + ++++D
Sbjct: 158 IKEDQTLYYTVQLVD 172
>U23147-4|AAC46689.1| 464|Caenorhabditis elegans Hypothetical
protein C18H9.5 protein.
Length = 464
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 217 NETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEF 324
N+TPN +VS + T+ DG F+SS+ R + +F
Sbjct: 223 NDTPNDHKNVSSTELRTIRDGKIFESSKHRPQNVKF 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,724,071
Number of Sequences: 27780
Number of extensions: 397392
Number of successful extensions: 1030
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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