Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29o18
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    78   2e-16
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    28   0.24 
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   0.96 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.7  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   6.7  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   8.9  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   8.9  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 78.2 bits (184), Expect = 2e-16
 Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
 Frame = +1

Query: 376 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 555
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+  AQT
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220

Query: 556 GSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPTRELAQQ 681
           GSGKT A++LP I H ++ +  +  R   P  +++APTRELA Q
Sbjct: 221 GSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQ 264


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 511 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 636
           P+A + K L   AQ  + ++   I  A+V +  Q  +RR DG
Sbjct: 451 PVASNYKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 128 TVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLE 247
           T++ +L+E   S +  LDL    +D  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +3

Query: 468  NGLQRTDAYSSSRLADSYVWKEFSWRSSNGFRQN 569
            N ++R+ A S   + ++++   F W  S   R+N
Sbjct: 3086 NHMERSSASSLHNMFNNWIKLPFEWLFSTSMREN 3119


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
 Frame = -1

Query: 274  PNLGDACSDLQRILF----SHQILQILQIYCH 191
            P  GDA  D++ +LF    S +I   +Q  CH
Sbjct: 939  PECGDAVEDVEHVLFHCPRSDRIRNEMQQRCH 970


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 182 LATVAVDLEDLEDLVGKKNSLEVRTCVAQIGIL 280
           L  +A+D+  L+  +GKK +L V   +  +G +
Sbjct: 176 LMAIAIDMNPLKPRMGKKATLCVAASIWIVGTI 208


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 328 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 420
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,184
Number of Sequences: 2352
Number of extensions: 13822
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)