Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29o18
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 136 2e-32
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 128 4e-30
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 120 1e-27
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 115 4e-26
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 92 4e-19
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 88 6e-18
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 84 8e-17
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 84 8e-17
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 84 8e-17
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 77 1e-14
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 71 6e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 71 6e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 71 6e-13
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 70 2e-12
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 70 2e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 66 2e-11
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 66 2e-11
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 66 2e-11
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 66 2e-11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 63 2e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 63 2e-10
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 62 5e-10
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 56 2e-08
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 56 2e-08
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 56 3e-08
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 56 3e-08
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 55 4e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 55 5e-08
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 54 9e-08
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 52 3e-07
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 51 9e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 47 1e-05
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 45 6e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 45 6e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.002
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 34 0.11
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 33 0.14
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.25
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.33
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.44
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 0.58
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.58
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.76
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 1.0
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 1.0
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 2.3
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 2.3
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 5.4
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 28 5.4
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 5.4
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 5.4
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 5.4
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 7.1
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 136 bits (328), Expect = 2e-32
Identities = 63/142 (44%), Positives = 96/142 (67%)
Frame = +1
Query: 256 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN 435
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 436 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 615
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 616 PIRRGDGPIALVLAPTRELAQQ 681
+RG+GP LVL PTRELAQQ
Sbjct: 196 HRQRGEGPAVLVLLPTRELAQQ 217
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 128 bits (309), Expect = 4e-30
Identities = 56/138 (40%), Positives = 89/138 (64%)
Frame = +1
Query: 268 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDY 447
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 448 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 627
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 628 GDGPIALVLAPTRELAQQ 681
G+GP+A+++ PTRELA Q
Sbjct: 336 GEGPVAVIVVPTRELAIQ 353
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 120 bits (289), Expect = 1e-27
Identities = 59/143 (41%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
Frame = +1
Query: 256 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEA 432
+ + D V + F KNFY + + + EV+ YR + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 433 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 612
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 613 PPIRRGDGPIALVLAPTRELAQQ 681
P + GDGPIA++LAPTRELA Q
Sbjct: 370 PELEEGDGPIAVILAPTRELAMQ 392
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 115 bits (276), Expect = 4e-26
Identities = 53/111 (47%), Positives = 77/111 (69%), Gaps = 4/111 (3%)
Frame = +1
Query: 361 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 540
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 541 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQ 681
GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQ
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQ 393
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 91.9 bits (218), Expect = 4e-19
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 14/146 (9%)
Frame = +1
Query: 286 LQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEANFPD 444
++P ++ Y SP +++E Y N + V S V++ P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 445 YVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ-PP 618
G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSGKTLA++LPA++HI+ Q
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQ 152
Query: 619 IRRGD-----GPIALVLAPTRELAQQ 681
+ D P LVL+PTRELAQQ
Sbjct: 153 YEKNDEEQKPSPFVLVLSPTRELAQQ 178
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 87.8 bits (208), Expect = 6e-18
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Frame = +1
Query: 316 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 492
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 493 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 663
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 664 RELAQQ 681
RELA+Q
Sbjct: 276 RELARQ 281
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 84.2 bits (199), Expect = 8e-17
Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Frame = +1
Query: 370 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 549
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 550 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQ 681
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA Q
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQ 237
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 84.2 bits (199), Expect = 8e-17
Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Frame = +1
Query: 370 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 549
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 550 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQ 681
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA Q
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQ 221
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 84.2 bits (199), Expect = 8e-17
Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Frame = +1
Query: 370 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 549
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 550 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQ 681
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA Q
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQ 218
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 77.0 bits (181), Expect = 1e-14
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Frame = +1
Query: 379 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 558
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 559 SGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQ 681
SGKT A+++P + I P R+ P ALVL+PTREL+ Q
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQ 265
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 71.3 bits (167), Expect = 6e-13
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Frame = +1
Query: 409 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 588
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 589 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQ 681
+ + + + G+G P ++L PTRELA Q
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 71.3 bits (167), Expect = 6e-13
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Frame = +1
Query: 409 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 588
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 589 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQ 681
+ + + + G+G P ++L PTRELA Q
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 71.3 bits (167), Expect = 6e-13
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Frame = +1
Query: 409 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 588
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 589 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQ 681
+ + + + G+G P ++L PTRELA Q
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +1
Query: 409 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 588
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 589 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQ 681
+ + + + G +G P ++L PTRELA Q
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +1
Query: 409 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 588
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 589 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQ 681
+ + + + G +G P ++L PTRELA Q
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Frame = +1
Query: 421 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 600
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 601 INNQPPIR-RGDG---PIALVLAPTRELAQQ 681
+ ++ + G+G P ++L PTREL Q
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Frame = +1
Query: 421 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 600
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 601 INNQPPIR-RGDG---PIALVLAPTRELAQQ 681
+ ++ + G+G P ++L PTREL Q
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = +1
Query: 421 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 600
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 601 INNQPPIRRGDGPIALVLAPTRELAQQ 681
+ +P + LVL PTRELA Q
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQ 234
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Frame = +1
Query: 421 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 600
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 601 INNQPPIR-RGDG---PIALVLAPTRELAQQ 681
+ ++ + G+G P ++L PTREL Q
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/93 (34%), Positives = 54/93 (58%)
Frame = +1
Query: 403 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 582
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 583 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 681
+P + + R G AL+++PTRELA Q
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQ 108
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/93 (34%), Positives = 54/93 (58%)
Frame = +1
Query: 403 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 582
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 583 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 681
+P + + R G AL+++PTRELA Q
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQ 108
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +1
Query: 421 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 600
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 601 INNQPPIRRGDGPIALVLAPTRELAQQ 681
++ P G AL+L PTRELA Q
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQ 172
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +1
Query: 421 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 600
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 601 INNQPPIRRGDGPIALVLAPTRELAQQ 681
++ P G AL+L PTRELA Q
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQ 172
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 60.1 bits (139), Expect = 1e-09
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Frame = +1
Query: 439 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 603
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 604 --NNQPPIRRGDGPIALVLAPTRELAQQ 681
+ + GP AL++APTREL Q
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQ 250
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 58.4 bits (135), Expect = 4e-09
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Frame = +1
Query: 328 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 507
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 508 WPIAMSGKNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTREL 672
P +N++ A TGSGKTLA+ LP I+ + + + +A+VL PTREL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 673 AQQ 681
A Q
Sbjct: 217 AAQ 219
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +1
Query: 421 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 600
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 601 INNQPPIRRGDGPIALVLAPTRELAQQ 681
+ + P LVL PTRELA Q
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQ 127
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +1
Query: 421 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 600
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 601 INNQPPIRRGD-GPIALVLAPTRELAQQ 681
+ + G GP A+++APT+EL Q
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQ 178
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Frame = +1
Query: 448 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQ 612
+ + +K + Y IQ P + G +++G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 613 PPIRRGDGPIALVLAPTRELAQQ 681
R+ DGP+AL+LAPTRELA Q
Sbjct: 452 NKARQDDGPLALILAPTRELAAQ 474
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/90 (31%), Positives = 55/90 (61%)
Frame = +1
Query: 412 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 591
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 592 IVHINNQPPIRRGDGPIALVLAPTRELAQQ 681
+ I+++ P + ALV+APTRELAQQ
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQ 112
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/90 (31%), Positives = 55/90 (61%)
Frame = +1
Query: 412 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 591
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 592 IVHINNQPPIRRGDGPIALVLAPTRELAQQ 681
+ I+++ P + ALV+APTRELAQQ
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQ 112
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +1
Query: 439 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI----- 603
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 604 NNQPPIRRGDGPIALVLAPTRELAQQ 681
++ P L++APTREL Q
Sbjct: 804 KDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +1
Query: 439 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI----- 603
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 604 NNQPPIRRGDGPIALVLAPTRELAQQ 681
++ P L++APTREL Q
Sbjct: 804 KDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/76 (36%), Positives = 51/76 (67%)
Frame = +1
Query: 454 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 633
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 634 GPIALVLAPTRELAQQ 681
G ++++PTREL+ Q
Sbjct: 140 GTGVIIVSPTRELSMQ 155
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 54.8 bits (126), Expect = 5e-08
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = +1
Query: 454 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 633
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P ++ +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDY 147
Query: 634 GPIALVLAPTRELAQQ 681
G AL+++PTRELA Q
Sbjct: 148 GLGALIISPTRELALQ 163
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 54.0 bits (124), Expect = 9e-08
Identities = 29/75 (38%), Positives = 48/75 (64%)
Frame = +1
Query: 457 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 636
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 637 PIALVLAPTRELAQQ 681
A+V+ PTRELA Q
Sbjct: 114 --AMVIVPTRELALQ 126
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/92 (29%), Positives = 53/92 (57%)
Frame = +1
Query: 406 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 585
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 586 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 681
+ ++ Q +R AL+L+PTRELA Q
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPTRELAVQ 109
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/90 (28%), Positives = 52/90 (57%)
Frame = +1
Query: 412 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 591
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 592 IVHINNQPPIRRGDGPIALVLAPTRELAQQ 681
+ ++ Q +R AL+L+PTRELA Q
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQ 109
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Frame = +1
Query: 475 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGD 633
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 634 GPIALVLAPTRELAQQ 681
GP AL++APTREL Q
Sbjct: 68 GPRALIVAPTRELVIQ 83
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +1
Query: 412 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 585
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 586 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 681
+ I+ P + LAPT ELA+Q
Sbjct: 268 TMLCRIDVNLMC-----PQCICLAPTLELAKQ 294
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +1
Query: 412 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 585
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 586 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 681
+ I+ P + LAPT ELA+Q
Sbjct: 293 TMLCRIDVNLMC-----PQCICLAPTLELAKQ 319
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +1
Query: 412 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 585
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 586 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 681
+ I+ P + LAPT ELA+Q
Sbjct: 677 TMLCRIDVNLMC-----PQCICLAPTLELAKQ 703
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/87 (25%), Positives = 49/87 (56%)
Frame = +1
Query: 421 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 600
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 601 INNQPPIRRGDGPIALVLAPTRELAQQ 681
+++ R +++ PTRE++ Q
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQ 105
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/87 (25%), Positives = 49/87 (56%)
Frame = +1
Query: 421 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 600
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 601 INNQPPIRRGDGPIALVLAPTRELAQQ 681
+++ R +++ PTRE++ Q
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQ 105
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/90 (33%), Positives = 47/90 (52%)
Frame = +1
Query: 412 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 591
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 592 IVHINNQPPIRRGDGPIALVLAPTRELAQQ 681
+ I N G AL+L+P+REL Q
Sbjct: 68 MRMIQNAKLQPADIG--ALILSPSRELCSQ 95
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 421 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 588
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 517 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 612
A+ GKN V VA TGSGKT I A+ HI +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +1
Query: 454 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 633
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 634 GPIALVLAPTRELAQQ 681
++LAP R +AQ+
Sbjct: 67 ---VILLAPQRGMAQR 79
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 511 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 615
P + +++ A TGSGKT+ Y+LP + + ++P
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP 185
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +1
Query: 529 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQ 681
+ L+ A TG GKT A+++PAI + + +P I P L+LA T L +Q
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQ 184
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 472 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 615
G+K PIQ Q + + S +N++ A GSGKT L + H N P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTP 1366
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 493 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 594
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 493 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 594
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 122 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 238
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 490 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 597
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 490 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 597
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 564 AGTRLSYAN*ILS---RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLN 394
+G L AN IL R +YR N + + + Y + +I + F + + ++NLN
Sbjct: 13 SGVFLFIANIILFLVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLN 72
Query: 393 ATYSYLVIISVLFD 352
T +L I+++F+
Sbjct: 73 VTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 564 AGTRLSYAN*ILS---RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLN 394
+G L AN IL R +YR N + + + Y + +I + F + + ++NLN
Sbjct: 13 SGVFLFIANIILFLVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLN 72
Query: 393 ATYSYLVIISVLFD 352
T +L I+++F+
Sbjct: 73 VTNEWLNKIAIIFN 86
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 553 TGSGKTLAYILPAIVH 600
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 174 RIIAEFVASSKFGTTVSTAIIPV 106
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 174 RIIAEFVASSKFGTTVSTAIIPV 106
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 28.3 bits (60), Expect = 5.4
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = +1
Query: 472 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 648
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH---LAEDGSVKL 329
Query: 649 ------VLAPTRELAQQ 681
+APT+ L Q+
Sbjct: 330 EEFKIVYIAPTKSLVQE 346
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 514 IAMSGKNLVGVAQTGSGKTL 573
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 514 IAMSGKNLVGVAQTGSGKTL 573
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -2
Query: 525 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 346
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 345 W*SFENCRMWIIKVF 301
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 250 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 149
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 316 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 474
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 316 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 474
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 271 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPI 414
+ + L+ FN+ Y+ PT L + +E+YR + + G+ NP+
Sbjct: 165 YSNALLKSFNE-IYNDKPTALIENLKTIEKYRKGNVLNQMGLRHRNPL 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,626,480
Number of Sequences: 27780
Number of extensions: 302051
Number of successful extensions: 964
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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