Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29o08
(687 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O15371 Cluster: Eukaryotic translation initiation facto... 196 4e-49
UniRef50_UPI0000D57960 Cluster: PREDICTED: similar to CG10161-PB... 173 3e-42
UniRef50_Q9VGC7 Cluster: CG4810-PA; n=6; Coelomata|Rep: CG4810-P... 118 1e-25
UniRef50_Q5KMK1 Cluster: Eukaryotic translation initiation facto... 108 1e-22
UniRef50_Q554U9 Cluster: EIF-3 zeta; n=2; Dictyostelium discoide... 101 2e-20
UniRef50_Q5DAD4 Cluster: SJCHGC06210 protein; n=1; Schistosoma j... 100 3e-20
UniRef50_P30642 Cluster: Putative eukaryotic translation initiat... 97 3e-19
UniRef50_Q1E4Z3 Cluster: Eukaryotic translation initiation facto... 89 1e-16
UniRef50_Q6C1N1 Cluster: Yarrowia lipolytica chromosome F of str... 69 1e-10
UniRef50_A6SJW6 Cluster: Translation initiation factor eIF3; n=2... 67 4e-10
UniRef50_O94236 Cluster: Eukaryotic translation initiation facto... 67 4e-10
UniRef50_P56820 Cluster: Eukaryotic translation initiation facto... 50 5e-05
UniRef50_A4S0Y6 Cluster: Predicted protein; n=2; Ostreococcus|Re... 49 1e-04
UniRef50_A7AM33 Cluster: Eukaryotic translation initiation facto... 45 0.002
UniRef50_A7R8V8 Cluster: Chromosome undetermined scaffold_3017, ... 34 2.8
UniRef50_Q98FQ0 Cluster: Spermidine/putrescine ABC transporter, ... 34 3.7
UniRef50_A6LMZ5 Cluster: Phage tail tape measure protein, TP901 ... 34 3.7
UniRef50_A6L194 Cluster: Putative outer membrane protein, probab... 33 4.9
UniRef50_A0KMU6 Cluster: Oligopeptide transport ATP-binding prot... 33 4.9
UniRef50_O44131 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
>UniRef50_O15371 Cluster: Eukaryotic translation initiation factor 3
subunit 7; n=40; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 7 - Homo sapiens (Human)
Length = 548
Score = 196 bits (478), Expect = 4e-49
Identities = 102/210 (48%), Positives = 129/210 (61%), Gaps = 18/210 (8%)
Frame = +3
Query: 111 RFISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWT--MVQDKKYQNKYASQ 284
+F++P+IQDNP+GWGP +P+QFRDMPYQPFSKGDRLGK++DWT QDK+Y NKY+SQ
Sbjct: 3 KFMTPVIQDNPSGWGPCAVPEQFRDMPYQPFSKGDRLGKVADWTGATYQDKRYTNKYSSQ 62
Query: 285 FGAGSSYAYFHDEDESTFHLVDTTRVQK-PYQ------SYQXXXXXXXXXXXXXXXXXXX 443
FG GS YAYFH+EDES+F LVDT R QK YQ + +
Sbjct: 63 FGGGSQYAYFHEEDESSFQLVDTARTQKTAYQRNRMRFAQRNLRRDKDRRNMLQFNLQIL 122
Query: 444 XMTTLNKPRER-----KLGKRWGQR----GAPMKIRDASVTVRPTWVTIEDMDFPRLAKL 596
+ K RER K K++G R K RD+SV VR W E+MDFP+L K+
Sbjct: 123 PKSAKQKERERIRLQKKFQKQFGVRQKWDQKSQKPRDSSVEVRSDWEVKEEMDFPQLMKM 182
Query: 597 SLPGIKEGEDIVSCGTLEYYDKAYDRVNVK 686
+ E +DI CG LEYYDKA+DR+ +
Sbjct: 183 RYLEVSEPQDIECCGALEYYDKAFDRITTR 212
>UniRef50_UPI0000D57960 Cluster: PREDICTED: similar to CG10161-PB;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG10161-PB - Tribolium castaneum
Length = 228
Score = 173 bits (421), Expect = 3e-42
Identities = 76/92 (82%), Positives = 84/92 (91%), Gaps = 3/92 (3%)
Frame = +3
Query: 111 RFISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWT--MVQDKKYQNKYASQ 284
+F++P+IQDNPTGWGP E+PDQF+DMPYQPFSKGDRLGKISDWT QDKKY NKYASQ
Sbjct: 12 KFVAPVIQDNPTGWGPCELPDQFKDMPYQPFSKGDRLGKISDWTGAAFQDKKYANKYASQ 71
Query: 285 FGAGSSYAYFHDEDESTFHLVDTTRVQK-PYQ 377
FG+GS YAY+HDEDESTFHLVDTTRVQK PYQ
Sbjct: 72 FGSGSQYAYYHDEDESTFHLVDTTRVQKPPYQ 103
Score = 104 bits (249), Expect = 2e-21
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +3
Query: 513 MKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGIKEGEDIVSCGTLEYYDKAYDRVNVK 686
+KIRDASVTV+P WVTIE+MDFPRL KLSLP +K+GEDI CG LEYYDK+YD VNVK
Sbjct: 121 IKIRDASVTVKPDWVTIEEMDFPRLGKLSLPNVKDGEDITCCGELEYYDKSYDHVNVK 178
>UniRef50_Q9VGC7 Cluster: CG4810-PA; n=6; Coelomata|Rep: CG4810-PA -
Drosophila melanogaster (Fruit fly)
Length = 551
Score = 118 bits (285), Expect = 1e-25
Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
Frame = +3
Query: 114 FISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWT-MVQDKKYQNKYASQFG 290
FI P ++ N GWGP E+P+ D+PYQPF K DRLGKI DWT MV +KK+ +KYAS FG
Sbjct: 7 FIKPYVEYNEHGWGPCEVPEL--DVPYQPFCKSDRLGKICDWTAMVPEKKFPSKYASTFG 64
Query: 291 AGSSYAYFHDEDESTFHLVDTT--RVQKPYQ 377
S YAYF+++D+STFHLVDTT + KPYQ
Sbjct: 65 NNSQYAYFYEDDDSTFHLVDTTGSKATKPYQ 95
Score = 97.1 bits (231), Expect = 4e-19
Identities = 42/76 (55%), Positives = 60/76 (78%)
Frame = +3
Query: 459 NKPRERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGIKEGEDIVSC 638
N + +G+R+G R AP +IR++SV V+ WV+IE++DFPRL KL+LP IK+G+DI +C
Sbjct: 143 NTRNTQNMGRRFG-RNAPTRIRESSVMVQSDWVSIEEIDFPRLLKLALPNIKDGKDIATC 201
Query: 639 GTLEYYDKAYDRVNVK 686
G LE+YDK YDRVN++
Sbjct: 202 GWLEFYDKLYDRVNLR 217
>UniRef50_Q5KMK1 Cluster: Eukaryotic translation initiation factor 3
subunit 7, putative; n=1; Filobasidiella neoformans|Rep:
Eukaryotic translation initiation factor 3 subunit 7,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 547
Score = 108 bits (259), Expect = 1e-22
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Frame = +3
Query: 114 FISPIIQDNPTG-WGPYE--MPDQFRDMPYQPFSKGDRLGKISDWTMVQDKKYQNKYASQ 284
F+ P I DN G WGP +P QF+D+PY PFSK D++ +I+DW Q + ++
Sbjct: 4 FVLPPIHDNSDGSWGPSTSTLPAQFKDIPYAPFSKSDKITRIADWHDPQAEAAAGTRTAR 63
Query: 285 ----------FGA--GSSYAYFHDEDESTFHLVDT-----TRVQKPYQSYQXXXXXXXXX 413
+GA G+ + + HDEDE +F LVD+ R + P +
Sbjct: 64 TVQSGGRRTAYGAAEGTVFGFVHDEDEKSFSLVDSGVRVGARGKAPIRGRSVRGVASARG 123
Query: 414 XXXXXXXXXXXMTTLNKPRERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAK 593
T + R +G P + RD+SVT+ P W +E++DF RL+K
Sbjct: 124 ARGRGGQRGGFSTRGGRGGARG---GYGDWNKPQRTRDSSVTIGPEWEVLEEIDFNRLSK 180
Query: 594 LSLPGIKEGEDIVSCGTLEYYDKAYDRVNVK 686
LSL +++ ED+ S GT++ YDK +DR+N +
Sbjct: 181 LSL-SVEDPEDLASYGTVQAYDKTFDRINTR 210
>UniRef50_Q554U9 Cluster: EIF-3 zeta; n=2; Dictyostelium
discoideum|Rep: EIF-3 zeta - Dictyostelium discoideum
AX4
Length = 527
Score = 101 bits (241), Expect = 2e-20
Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Frame = +3
Query: 129 IQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDW-TMVQDKKYQNKYASQFGAGSSY 305
I+ NPTGWGP ++F D+PY PFSKGD++GK SDW + V++ + QN Y S A + +
Sbjct: 8 IKVNPTGWGPVGKLEKFTDIPYAPFSKGDKIGKCSDWNSNVRNYQRQN-YGS--NAFNPF 64
Query: 306 AYFHDEDESTFHLVDTTRVQKPYQSYQXXXXXXXXXXXXXXXXXXXXMTTLNKPRERKLG 485
+ ++DE +F LVD TRVQ ++ R + G
Sbjct: 65 TFKLEDDEDSFTLVDYTRVQNKLKNKGKTYQKQFYQQNKRGGSNAGGRGGRGGMRGGRFG 124
Query: 486 ---KRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGIKEGEDIVSCGTLEYY 656
K W R + R++S+ + +W + E+ D + ++ + E E I + G ++YY
Sbjct: 125 SNNKYWNDR--RQRNRESSIEILSSWESKEEFDLSTFKQYTVEQLPEPETIGTYGQVKYY 182
Query: 657 DKAYDRVNVK 686
+K YDR+N K
Sbjct: 183 NKVYDRINAK 192
>UniRef50_Q5DAD4 Cluster: SJCHGC06210 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06210 protein - Schistosoma
japonicum (Blood fluke)
Length = 648
Score = 100 bits (240), Expect = 3e-20
Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = +3
Query: 75 MSEHVLPAEGPMRFISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWT--MV 248
M HVLP G + + +NP GWGP ++P +F++MP+QPFSK RLG+++DW+ +
Sbjct: 1 MKAHVLPEFGSLS-----LNENPAGWGPTDIPMEFKNMPFQPFSKDTRLGRVADWSGNIF 55
Query: 249 QDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRVQK 368
QD K + +Y S F GS YAY+HDED++ F LV + R K
Sbjct: 56 QDMKTKGRYISPF-VGSQYAYYHDEDDNNFQLVSSVRETK 94
Score = 78.2 bits (184), Expect = 2e-13
Identities = 31/68 (45%), Positives = 48/68 (70%)
Frame = +3
Query: 483 GKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGIKEGEDIVSCGTLEYYDK 662
G +R A +RDAS+ ++ W +E++DF RL+KL+LP +KE ++ V CG +EYYDK
Sbjct: 184 GSNSDRRQAHRAVRDASIQIKDNWTMLEELDFTRLSKLALPNVKEPDNKVDCGEMEYYDK 243
Query: 663 AYDRVNVK 686
+YDRV+ +
Sbjct: 244 SYDRVSTR 251
>UniRef50_P30642 Cluster: Putative eukaryotic translation initiation
factor 3 subunit 7; n=2; Caenorhabditis|Rep: Putative
eukaryotic translation initiation factor 3 subunit 7 -
Caenorhabditis elegans
Length = 570
Score = 97.5 bits (232), Expect = 3e-19
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Frame = +3
Query: 129 IQDNPTGWGPYEMPDQFRD-MPYQPFSKGDRLGKISDWTMVQ------DKKYQNK-YASQ 284
+ DN GWGP + +P+Q F+K DR+G+++DW V +++Y + Y S
Sbjct: 11 LADNTVGWGPLASSSSADEPVPFQQFNKADRIGRVADWIGVDRFYRRGNERYNERVYGSA 70
Query: 285 FGAGSSYAYFHDEDESTFHLVDTTR--VQKPYQSYQXXXXXXXXXXXXXXXXXXXXMTTL 458
AGS + Y H DE F LVDT++ + P ++++ +
Sbjct: 71 ANAGSQFDYIHGMDEHNFQLVDTSKPMARNPQRNFRVRQMHLRKMMQKENEKREMVNQST 130
Query: 459 NKPRERKLGK----------------RWGQRGA-------PMKIRDASVTVRPTWVTIED 569
N +R + K R GQRG K R SV VRP WV +E+
Sbjct: 131 NLRMKRSIAKEQQRAFKMWQRRGGNARQGQRGQGGRFGGDRPKERLPSVQVRPEWVVLEE 190
Query: 570 MDFPRLAKLSLPGIKEGEDI--VSCGTLEYYDKAYDRVNVK 686
M+ +KL+LP I G+DI G+L+YYDK DRV+VK
Sbjct: 191 MNLSAFSKLALPNIPGGDDIGDHQYGSLQYYDKTIDRVSVK 231
>UniRef50_Q1E4Z3 Cluster: Eukaryotic translation initiation factor 3
subunit 7 homolog; n=15; Dikarya|Rep: Eukaryotic
translation initiation factor 3 subunit 7 homolog -
Coccidioides immitis
Length = 598
Score = 88.6 bits (210), Expect = 1e-16
Identities = 68/211 (32%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Frame = +3
Query: 150 WGPYEMPDQFRD-MPYQPFSKGDRLGKISDW-TMVQDKK------YQNKYASQ--FGAGS 299
WGP D +PY PFSKGD+LG+++DW +D + Y Y Q +GAG+
Sbjct: 20 WGPPVPTGNHLDGVPYAPFSKGDKLGRMADWGADSKDSRERGRQAYNRNYRDQQVYGAGT 79
Query: 300 S--YAYFHDEDESTFHLVDTTRVQKPYQSYQXXXXXXXXXXXXXXXXXXXXMTTLNKPRE 473
S +A EDES+F +VD TR + + +P
Sbjct: 80 SSLFAVQVAEDESSFSVVDNTRTSVKTRGFGRGGGTIFRGRGQRGGAQRGRGGAFQRPAG 139
Query: 474 RKLGKRWG-----QRGA---------------PMKIRDASVTVRPTWVTIEDMDFPRLAK 593
+ G+ G QRG P + RD+SV +RP W +E++DF RL+K
Sbjct: 140 GRGGQAGGDRYYDQRGGRGNRGRRFGWKDYDKPQRNRDSSVAIRPEWSMLEEIDFSRLSK 199
Query: 594 LSLPGIKEGEDIVSCGTLEYYDKAYDRVNVK 686
L+L +GED+ + G L YYD++YD+ VK
Sbjct: 200 LNLE-TPDGEDLDNYGFLYYYDRSYDKAPVK 229
>UniRef50_Q6C1N1 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 532
Score = 68.9 bits (161), Expect = 1e-10
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Frame = +3
Query: 123 PIIQDNPTGWGPYE-MPD--QFRDMPYQPFSKGDRLGKISDWTMVQDKKYQNKYASQFG- 290
P + D WGP +P+ +F D+PY PFSKGD+LGK++DW + K +++ +QFG
Sbjct: 6 PALLDANAPWGPPSTVPEDLKFDDVPYAPFSKGDKLGKVADWA-AETKDGKDQKRTQFGK 64
Query: 291 ---------AGSSYAYFHDEDE---STFHLVDTTR-VQKPYQSYQXXXXXXXXXXXXXXX 431
SS ++F +ED S+F +VD + KP +
Sbjct: 65 NFRDPYHAYGASSASFFTNEDAEELSSFSVVDNAKNANKPRGTATVLKTRGGAPRGGSFA 124
Query: 432 XXXXXMTTLNKPRERKLGKRWGQRG----------------APMKIRDASVTVRPTWVTI 563
+ G GQRG P +IR+ASV + W I
Sbjct: 125 GRGGSQRGGRFQNQPGRGPVGGQRGPNPRFGKSKFGWRDFDKPQRIRNASVDITDDWTEI 184
Query: 564 EDMDFPRLAKLSLPGIKEGEDIVSCGTLEYYDKAYDRVN 680
+++ + + KLS + +G +I + G L YD+ +DR N
Sbjct: 185 QEITYSEMQKLSY-DVAQGVEIDTYGDLFPYDRKFDRTN 222
>UniRef50_A6SJW6 Cluster: Translation initiation factor eIF3; n=2;
Sclerotiniaceae|Rep: Translation initiation factor eIF3
- Botryotinia fuckeliana B05.10
Length = 600
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/71 (47%), Positives = 46/71 (64%)
Frame = +3
Query: 474 RKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGIKEGEDIVSCGTLEY 653
RK G W P + RDASV ++P W +E++DF RLAKL+L +GEDI S G L Y
Sbjct: 186 RKFG--WKDYDKPQRNRDASVNIKPDWKMLEEIDFNRLAKLNL-DTDDGEDIDSYGFLYY 242
Query: 654 YDKAYDRVNVK 686
YD+++D+ VK
Sbjct: 243 YDRSFDKQPVK 253
Score = 41.9 bits (94), Expect = 0.014
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 117 ISPIIQDNPT--GWGPYEMPDQ-FRDMPYQPFSKGDRLGKISDWT 242
+S II P+ WGP + +PY P+SKGD+LG+++DWT
Sbjct: 6 LSDIISALPSEDSWGPSTTSETTLNGVPYAPYSKGDKLGRMADWT 50
>UniRef50_O94236 Cluster: Eukaryotic translation initiation factor 3
subunit 7 homolog; n=3; Schizosaccharomyces pombe|Rep:
Eukaryotic translation initiation factor 3 subunit 7
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 567
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Frame = +3
Query: 114 FISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWTMVQDK------------ 257
F P + + WGP E D+PY PFSKGDRLGKI+DW++ Q K
Sbjct: 5 FKLPELAPVKSAWGPPETEQIGGDIPYAPFSKGDRLGKIADWSVDQPKDGREQRGRQGAF 64
Query: 258 --KYQNKYASQ-FGAGSSYAYFHDEDESTFHLVDTTRVQK 368
+++++Y + +GA S + Y H EDES+F ++D V +
Sbjct: 65 AGRFRDQYQTYGYGASSIFGYQHSEDESSFSVIDRGSVNR 104
>UniRef50_P56820 Cluster: Eukaryotic translation initiation factor 3
subunit 7; n=11; Magnoliophyta|Rep: Eukaryotic
translation initiation factor 3 subunit 7 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 591
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +3
Query: 528 ASVTVRPTWVTIEDMDFPRLAKLSLPGIKEGEDIVSCGTLEYYDKAYDRVNVK 686
+SV ++P W +E + F +KLS ++E ED++ CG LEYY++ +DR+ K
Sbjct: 183 SSVDIQPEWNMLEQIPFSTFSKLSYT-VQEPEDLLLCGGLEYYNRLFDRITPK 234
>UniRef50_A4S0Y6 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 416
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 528 ASVTVRPTWVTIEDMDFPRLAKLSLPGIKEG-EDIVSCGTLEYYDKAYDRVNVK 686
ASV +RP W +E + FP + K SL + ED+ + G++ ++DK+YDRV K
Sbjct: 46 ASVDIRPDWEVVEQIAFPEIIKQSLELAEAAPEDLATYGSVRWFDKSYDRVTPK 99
>UniRef50_A7AM33 Cluster: Eukaryotic translation initiation factor 3
subunit 7, putative; n=1; Babesia bovis|Rep: Eukaryotic
translation initiation factor 3 subunit 7, putative -
Babesia bovis
Length = 547
Score = 44.8 bits (101), Expect = 0.002
Identities = 48/201 (23%), Positives = 72/201 (35%), Gaps = 18/201 (8%)
Frame = +3
Query: 138 NPTGWGPYEMPDQ--------FRDMPYQPFSKGDRLGKISDWTMVQDKKYQNKYASQFGA 293
N +GWGP E DQ +P +P K DR ++ D+T YQ
Sbjct: 11 NASGWGPDESDDQTVVSSLGSLSKLPLEPRLKFDRQLRVCDFTYFT---YQKNIRDAGRY 67
Query: 294 GSSYAYFHDEDESTFHLVDTTRVQKP-----YQSYQXXXXXXXXXXXXXXXXXXXXMTTL 458
G ++E F VD + K Y+ M+
Sbjct: 68 GRQPVPVVVDEEMQFQTVDGRSLMKAKNMQHYRRKAVPKQTTQAFNQKQMEEEAMIMSAK 127
Query: 459 NKPRERKLGKRWGQRGAPMKIR-----DASVTVRPTWVTIEDMDFPRLAKLSLPGIKEGE 623
K E + + RG R + S+ +W + D+ F +L+K+ LPG G
Sbjct: 128 QKHPEMRKQRMMHSRGNRPTARHHTFNEWSIEPSHSWHLLSDIPFSQLSKVDLPGKVVGT 187
Query: 624 DIVSCGTLEYYDKAYDRVNVK 686
D+ G L YDK D ++ K
Sbjct: 188 DVTWRGKLGVYDKRMDHISAK 208
>UniRef50_A7R8V8 Cluster: Chromosome undetermined scaffold_3017,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3017, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 340
Score = 34.3 bits (75), Expect = 2.8
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 624 DIVSCGTLEYYDKAYDRVNVK 686
D++ CG LE+YD++YDRV K
Sbjct: 1 DLLLCGALEFYDRSYDRVTPK 21
>UniRef50_Q98FQ0 Cluster: Spermidine/putrescine ABC transporter,
periplasmic spermidine/putrescine-binding protein; n=2;
Mesorhizobium loti|Rep: Spermidine/putrescine ABC
transporter, periplasmic spermidine/putrescine-binding
protein - Rhizobium loti (Mesorhizobium loti)
Length = 360
Score = 33.9 bits (74), Expect = 3.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 228 ISDWTMVQDKKYQNKYASQFGAGSSYAYFHDEDES 332
+ DW+ +D + KY + G ++A+F DEDE+
Sbjct: 35 VFDWSGYEDPSFHPKYVEKNGDSPTFAFFGDEDEA 69
>UniRef50_A6LMZ5 Cluster: Phage tail tape measure protein, TP901
family; n=1; Thermosipho melanesiensis BI429|Rep: Phage
tail tape measure protein, TP901 family - Thermosipho
melanesiensis BI429
Length = 1120
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 386 AWAGSRTAWSWCQGCTYSWWYDNIEQAT*TQAW*EVGSTW 505
AW G TAW W W ++N+ Q T W + +TW
Sbjct: 524 AWEGIETAWDWLVN-GVDWLWENVLQPLGTGIWETLKTTW 562
>UniRef50_A6L194 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Bacteroides vulgatus
ATCC 8482|Rep: Putative outer membrane protein, probably
involved in nutrient binding - Bacteroides vulgatus
(strain ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 646
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 225 KISDWTMVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRVQKPYQSYQ 386
K+ +W ++D KY N + +G SY+ +D E DT R + Y+
Sbjct: 395 KVGNWVHMEDLKYNNPNSVYYGKHLSYSCINDNGEEQILCNDTVRTWFDWPHYK 448
>UniRef50_A0KMU6 Cluster: Oligopeptide transport ATP-binding protein
AppF; n=3; Aeromonas|Rep: Oligopeptide transport
ATP-binding protein AppF - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 330
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 590 GKTWEVHIFNRDPCW-PYSYRCITNLHRCTTLTPPLTKLAFTWLVQC 453
G+ E+ ++ + C P++ RC + RC PP++KLA V+C
Sbjct: 280 GRKGEIPLWTPESCGCPFAGRCNQAMPRCKETLPPVSKLADNHFVRC 326
>UniRef50_O44131 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 2224
Score = 33.5 bits (73), Expect = 4.9
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = -1
Query: 351 CPPGERCFHLHHGSMHKTN---QPRTVMHIC-SGTSCLAPLSNHLSCLIDRLC*MADRAC 184
CP G C K N QPR V++ C +G ++ + N SC D C + C
Sbjct: 657 CPQGSVCVMSSIQCYQKGNCVPQPRCVLNFCPAGEPYISSIGNAESCTKDEECPTSTHWC 716
Query: 183 P*IGLAS 163
+GLAS
Sbjct: 717 HKLGLAS 723
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 33.1 bits (72), Expect = 6.5
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -1
Query: 528 HHESS*VHHVDPTSYQACVHVACSMLSYHQEYVHPWHHDHAVLEPAH 388
HHE S HH P + H C +H E+ H HH H P H
Sbjct: 90 HHERSYEHHCHPENPHCPGHDHCH--EHHHEHEHGHHHHHHA-SPGH 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,266,743
Number of Sequences: 1657284
Number of extensions: 16056553
Number of successful extensions: 38526
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 37117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38469
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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