Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29o08
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   5.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   5.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   5.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   5.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.5  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 576 FPRLAKLSLPGIKEGEDI 629
           F R+  +  PG+  G+DI
Sbjct: 410 FKRIGNIKAPGVCHGDDI 427


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 576 FPRLAKLSLPGIKEGEDI 629
           F R+  +  PG+  G+DI
Sbjct: 412 FKRIGNIKAPGVCHGDDI 429


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 576 FPRLAKLSLPGIKEGEDI 629
           F R+  +  PG+  G+DI
Sbjct: 410 FKRIGNIKAPGVCHGDDI 427


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 576 FPRLAKLSLPGIKEGEDI 629
           F R+  +  PG+  G+DI
Sbjct: 412 FKRIGNIKAPGVCHGDDI 429


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 630 VSCGTLEYYDKAYDRVNVK 686
           VS    E+Y+  YD ++V+
Sbjct: 13  VSAAPAEFYESRYDHLDVE 31


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 585 LAKLSLPGIKEGEDIVSC 638
           + K ++P I  G D++SC
Sbjct: 184 IQKYAIPVILSGRDLMSC 201


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +2

Query: 377 VISAWAGSRTAWSWCQGCTYSWW 445
           ++   +  R AW WC    +++W
Sbjct: 120 IVKLPSAERVAWMWC--LIFAFW 140


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +2

Query: 377 VISAWAGSRTAWSWCQGCTYSWW 445
           ++   +  R AW WC    +++W
Sbjct: 120 IVKLPSAERVAWMWC--LIFAFW 140


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +2

Query: 377 VISAWAGSRTAWSWCQGCTYSWW 445
           ++   +  R AW WC    +++W
Sbjct: 120 IVKLPSAERVAWMWC--LIFAFW 140


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +2

Query: 377 VISAWAGSRTAWSWCQGCTYSWW 445
           ++   +  R AW WC    +++W
Sbjct: 120 IVKLPSAERVAWMWC--LIFAFW 140


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -2

Query: 512 RCTTLTPPLTKLAFTW 465
           RCT L     K AF W
Sbjct: 156 RCTKLCKEANKTAFLW 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,179
Number of Sequences: 336
Number of extensions: 4171
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)