Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29o08
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    23   0.79 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         26   1.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         26   1.3  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   1.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.8  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   6.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   6.8  
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    23   6.8  

>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 23.4 bits (48), Expect(2) = 0.79
 Identities = 8/23 (34%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = -1

Query: 333 CFHLHHGSMHKTNQ--PRTVMHI 271
           C+H H+G + KT++  P+T + +
Sbjct: 142 CYHQHYGYLRKTDRYVPKTPLEM 164



 Score = 21.4 bits (43), Expect(2) = 0.79
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 501 VDPTSYQACVHVACSMLSYHQEY 433
           ++P+    C     S L YHQ Y
Sbjct: 125 LEPSVTDVCERAHRSFLCYHQHY 147


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 474 VHVACSMLSYHQEYVHPWHHDHAVLEPAH 388
           +H A  +L Y Q  +HP HH  A+L PA+
Sbjct: 166 IHPAV-LLPYPQHVLHPAHHP-ALLHPAY 192


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 474 VHVACSMLSYHQEYVHPWHHDHAVLEPAH 388
           +H A  +L Y Q  +HP HH  A+L PA+
Sbjct: 166 IHPAV-LLPYPQHVLHPAHHP-ALLHPAY 192


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = -1

Query: 537 LQMHHESS*VHHVDPTSYQACVHVACSMLSYHQEYVHP-WHHDHAVLEPAHADMTG 373
           L  HH     HHV P    + V+ A    S+H    HP  HH H    P  AD+ G
Sbjct: 472 LHSHHSP---HHVSP-GMGSTVNGASLTHSHH---AHPHHHHHHHHHHPTAADLAG 520


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = -1

Query: 348 PPGERCFHLHHGSMHKTNQPRTVMHICSGTSCLAPLSNH 232
           P G    HLHH   H   QP    H   G      LS H
Sbjct: 811 PVGAGSHHLHHLHHHAAQQPPPGSH--PGAQTQPQLSQH 847


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -1

Query: 540 QLQMHHESS*VHHVDPTSYQACVHVACSMLSYHQEYVHPWHHDH 409
           Q Q HH+     H      Q+  H +    S HQ+  H  HH H
Sbjct: 249 QQQTHHQQQ--QHPSSHQQQSQQHPS----SQHQQPTHQTHHHH 286


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -1

Query: 540 QLQMHHESS*VHHVDPTSYQACVHVACSMLSYHQEYVHPWHHDH 409
           Q Q HH+     H      Q+  H +    S HQ+  H  HH H
Sbjct: 249 QQQTHHQQQ--QHPSSHQQQSQQHPS----SQHQQPTHQTHHHH 286


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -1

Query: 540 QLQMHHESS*VHHVDPTSYQACVHVACSMLSYHQEYVHPWHHDH 409
           Q Q HH+     H      Q+  H +    S HQ+  H  HH H
Sbjct: 201 QQQTHHQQQ--QHPSSHQQQSQQHPS----SQHQQPTHQTHHHH 238


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 447 MTTLNKPRERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMD 575
           +T+   P  + L  R+G              V PT VTI+D+D
Sbjct: 37  LTSRYSPIGQNLANRFGPNSPASSQVSNDTGVPPTVVTIKDLD 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,337
Number of Sequences: 2352
Number of extensions: 18350
Number of successful extensions: 31
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)