Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29o08
(687 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023923-1|ABB36427.1| 560|Drosophila melanogaster RH04128p pro... 232 4e-61
AF220363-1|AAF37264.1| 560|Drosophila melanogaster eukaryotic t... 232 4e-61
AE014297-3351|AAF56158.1| 560|Drosophila melanogaster CG10161-P... 232 4e-61
AY119516-1|AAM50170.1| 551|Drosophila melanogaster GH14470p pro... 118 6e-27
AE014297-1458|AAF54756.1| 551|Drosophila melanogaster CG4810-PA... 118 6e-27
AE014296-390|AAF47594.1| 553|Drosophila melanogaster CG12361-PA... 31 1.1
AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,... 31 2.0
M81796-1|AAA28736.1| 974|Drosophila melanogaster optomotor-blin... 29 7.9
AY069309-1|AAL39454.1| 549|Drosophila melanogaster LD02044p pro... 29 7.9
AE014298-631|AAF45946.2| 972|Drosophila melanogaster CG3578-PA ... 29 7.9
AE014296-2159|AAF49901.1| 549|Drosophila melanogaster CG10627-P... 29 7.9
>BT023923-1|ABB36427.1| 560|Drosophila melanogaster RH04128p
protein.
Length = 560
Score = 232 bits (567), Expect = 4e-61
Identities = 119/218 (54%), Positives = 140/218 (64%), Gaps = 14/218 (6%)
Frame = +3
Query: 75 MSEHVLPAEGPMRFISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWTMVQ- 251
MSE + A F P +Q N GWGP E+PD F+D+PYQPFSK DRLGKI DWT
Sbjct: 1 MSETINTAAQFPSFEKPTVQFNEKGWGPCELPDTFKDVPYQPFSKNDRLGKICDWTNTSN 60
Query: 252 -DKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRVQKPYQS----YQXXXXXXXXXX 416
DKKYQNKYAS FG G Y+Y+H+EDE+TFHLVDT RVQKP
Sbjct: 61 NDKKYQNKYASSFGTGIQYSYYHEEDETTFHLVDTARVQKPPHQRGRFRNMRNSRSGRGR 120
Query: 417 XXXXXXXXXXMTTLN----KPRE----RKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDM 572
MTTL+ K R+ R +GK++G RG P K+R++SV VR W +IE+M
Sbjct: 121 NARGGLNTHGMTTLSGKNVKARDPRHGRGMGKKFGHRGPPPKMRESSVAVRADWASIEEM 180
Query: 573 DFPRLAKLSLPGIKEGEDIVSCGTLEYYDKAYDRVNVK 686
DFPRL KLSLP IKEG DIV+CGTLEYYDK YDR+NVK
Sbjct: 181 DFPRLIKLSLPNIKEGVDIVTCGTLEYYDKTYDRINVK 218
>AF220363-1|AAF37264.1| 560|Drosophila melanogaster eukaryotic
translation initiationfactor 3 p66 subunit protein.
Length = 560
Score = 232 bits (567), Expect = 4e-61
Identities = 119/218 (54%), Positives = 140/218 (64%), Gaps = 14/218 (6%)
Frame = +3
Query: 75 MSEHVLPAEGPMRFISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWTMVQ- 251
MSE + A F P +Q N GWGP E+PD F+D+PYQPFSK DRLGKI DWT
Sbjct: 1 MSETINTAAQFPSFEKPTVQFNEKGWGPCELPDTFKDVPYQPFSKNDRLGKICDWTNTSN 60
Query: 252 -DKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRVQKPYQS----YQXXXXXXXXXX 416
DKKYQNKYAS FG G Y+Y+H+EDE+TFHLVDT RVQKP
Sbjct: 61 NDKKYQNKYASSFGTGIQYSYYHEEDETTFHLVDTARVQKPPHQRGRFRNMRNSRSGRGR 120
Query: 417 XXXXXXXXXXMTTLN----KPRE----RKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDM 572
MTTL+ K R+ R +GK++G RG P K+R++SV VR W +IE+M
Sbjct: 121 NARGGLNTHGMTTLSGKNVKARDPRHGRGMGKKFGHRGPPPKMRESSVAVRADWASIEEM 180
Query: 573 DFPRLAKLSLPGIKEGEDIVSCGTLEYYDKAYDRVNVK 686
DFPRL KLSLP IKEG DIV+CGTLEYYDK YDR+NVK
Sbjct: 181 DFPRLIKLSLPNIKEGVDIVTCGTLEYYDKTYDRINVK 218
>AE014297-3351|AAF56158.1| 560|Drosophila melanogaster CG10161-PB
protein.
Length = 560
Score = 232 bits (567), Expect = 4e-61
Identities = 119/218 (54%), Positives = 140/218 (64%), Gaps = 14/218 (6%)
Frame = +3
Query: 75 MSEHVLPAEGPMRFISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWTMVQ- 251
MSE + A F P +Q N GWGP E+PD F+D+PYQPFSK DRLGKI DWT
Sbjct: 1 MSETINTAAQFPSFEKPTVQFNEKGWGPCELPDTFKDVPYQPFSKNDRLGKICDWTNTSN 60
Query: 252 -DKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRVQKPYQS----YQXXXXXXXXXX 416
DKKYQNKYAS FG G Y+Y+H+EDE+TFHLVDT RVQKP
Sbjct: 61 NDKKYQNKYASSFGTGIQYSYYHEEDETTFHLVDTARVQKPPHQRGRFRNMRNSRSGRGR 120
Query: 417 XXXXXXXXXXMTTLN----KPRE----RKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDM 572
MTTL+ K R+ R +GK++G RG P K+R++SV VR W +IE+M
Sbjct: 121 NARGGLNTHGMTTLSGKNVKARDPRHGRGMGKKFGHRGPPPKMRESSVAVRADWASIEEM 180
Query: 573 DFPRLAKLSLPGIKEGEDIVSCGTLEYYDKAYDRVNVK 686
DFPRL KLSLP IKEG DIV+CGTLEYYDK YDR+NVK
Sbjct: 181 DFPRLIKLSLPNIKEGVDIVTCGTLEYYDKTYDRINVK 218
>AY119516-1|AAM50170.1| 551|Drosophila melanogaster GH14470p
protein.
Length = 551
Score = 118 bits (285), Expect = 6e-27
Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
Frame = +3
Query: 114 FISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWT-MVQDKKYQNKYASQFG 290
FI P ++ N GWGP E+P+ D+PYQPF K DRLGKI DWT MV +KK+ +KYAS FG
Sbjct: 7 FIKPYVEYNEHGWGPCEVPEL--DVPYQPFCKSDRLGKICDWTAMVPEKKFPSKYASTFG 64
Query: 291 AGSSYAYFHDEDESTFHLVDTT--RVQKPYQ 377
S YAYF+++D+STFHLVDTT + KPYQ
Sbjct: 65 NNSQYAYFYEDDDSTFHLVDTTGSKATKPYQ 95
Score = 97.1 bits (231), Expect = 2e-20
Identities = 42/76 (55%), Positives = 60/76 (78%)
Frame = +3
Query: 459 NKPRERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGIKEGEDIVSC 638
N + +G+R+G R AP +IR++SV V+ WV+IE++DFPRL KL+LP IK+G+DI +C
Sbjct: 143 NTRNTQNMGRRFG-RNAPTRIRESSVMVQSDWVSIEEIDFPRLLKLALPNIKDGKDIATC 201
Query: 639 GTLEYYDKAYDRVNVK 686
G LE+YDK YDRVN++
Sbjct: 202 GWLEFYDKLYDRVNLR 217
>AE014297-1458|AAF54756.1| 551|Drosophila melanogaster CG4810-PA
protein.
Length = 551
Score = 118 bits (285), Expect = 6e-27
Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
Frame = +3
Query: 114 FISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWT-MVQDKKYQNKYASQFG 290
FI P ++ N GWGP E+P+ D+PYQPF K DRLGKI DWT MV +KK+ +KYAS FG
Sbjct: 7 FIKPYVEYNEHGWGPCEVPEL--DVPYQPFCKSDRLGKICDWTAMVPEKKFPSKYASTFG 64
Query: 291 AGSSYAYFHDEDESTFHLVDTT--RVQKPYQ 377
S YAYF+++D+STFHLVDTT + KPYQ
Sbjct: 65 NNSQYAYFYEDDDSTFHLVDTTGSKATKPYQ 95
Score = 97.1 bits (231), Expect = 2e-20
Identities = 42/76 (55%), Positives = 60/76 (78%)
Frame = +3
Query: 459 NKPRERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGIKEGEDIVSC 638
N + +G+R+G R AP +IR++SV V+ WV+IE++DFPRL KL+LP IK+G+DI +C
Sbjct: 143 NTRNTQNMGRRFG-RNAPTRIRESSVMVQSDWVSIEEIDFPRLLKLALPNIKDGKDIATC 201
Query: 639 GTLEYYDKAYDRVNVK 686
G LE+YDK YDRVN++
Sbjct: 202 GWLEFYDKLYDRVNLR 217
>AE014296-390|AAF47594.1| 553|Drosophila melanogaster CG12361-PA
protein.
Length = 553
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Frame = -1
Query: 537 LQMHHESS*VHHVDPTSYQACVHVACSMLSYHQEYVHPWHHDHAVLEPAHADMTGTAFVL 358
+Q H HH + H ++ + + H HH H HA AF+
Sbjct: 1 MQQHSHQYQQHHQQQQPHSHPQHQPLAVPGHQHSHPHSHHHHHHHPGAGHAHFPHPAFLT 60
Query: 357 E*CPPGERCFHLHH-GSMHKTN--QPRTVMHICSGTSCLAPLSNH 232
PP + H H N QP+T S S ++ N+
Sbjct: 61 HQLPPHQHHQQQQHVQQQHPGNSCQPQTASSSSSPGSTISDSDNN 105
>AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,
isoform C protein.
Length = 1205
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 528 HHESS*VHHVDPTSYQACVHVACSMLSYHQE-YVHPWHHDHAVLEPAHADMT 376
HH S HH D + + H +L +HQ+ + H WHH A+L+ T
Sbjct: 941 HHHGSQHHHHD--ARHSHHHHHQPLLPHHQQQHPHHWHHRKALLQSGRGTAT 990
>M81796-1|AAA28736.1| 974|Drosophila melanogaster optomotor-blind
protein.
Length = 974
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = -1
Query: 546 ALQLQMHHESS*VHHVDPTSYQACVHVACSMLSYHQEYVHPWHHDHAVLEPAHADMTG 373
A LQ+ E++ HH +Q H + +HQ+ P H L H TG
Sbjct: 913 AAALQLAEEAAQHHHHTQAHHQQQQHQSHHQQQHHQQPAQPHPHHQTHLHSHHGATTG 970
>AY069309-1|AAL39454.1| 549|Drosophila melanogaster LD02044p
protein.
Length = 549
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 240 TMVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRV 362
+M +D K + S G YF +D+ FHL+D R+
Sbjct: 268 SMPEDVKPYTRCVSVDGDADRVVYFFTDDKGEFHLLDGDRI 308
>AE014298-631|AAF45946.2| 972|Drosophila melanogaster CG3578-PA
protein.
Length = 972
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = -1
Query: 546 ALQLQMHHESS*VHHVDPTSYQACVHVACSMLSYHQEYVHPWHHDHAVLEPAHADMTG 373
A LQ+ E++ HH +Q H + +HQ+ P H L H TG
Sbjct: 911 AAALQLAEEAAQHHHHTQAHHQQQQHQSHHQQQHHQQPAQPHPHHQTHLHSHHGATTG 968
>AE014296-2159|AAF49901.1| 549|Drosophila melanogaster CG10627-PA
protein.
Length = 549
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 240 TMVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRV 362
+M +D K + S G YF +D+ FHL+D R+
Sbjct: 268 SMPEDVKPYTRCVSVDGDADRVVYFFTDDKGEFHLLDGDRI 308
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,798,729
Number of Sequences: 53049
Number of extensions: 754715
Number of successful extensions: 2135
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2124
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -