Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29n17
(357 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37 pro... 155 3e-38
D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37 pro... 155 3e-38
CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein. 155 3e-38
BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein. 155 3e-38
BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37 p... 155 3e-38
AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37 p... 155 3e-38
S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37 pro... 153 2e-37
AB007183-1|BAA25842.1| 27|Homo sapiens ribosomal protein L37 p... 51 1e-06
AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA seq... 29 5.6
AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA seq... 29 5.6
BC033448-1|AAH33448.1| 460|Homo sapiens chromosome 6 open readi... 28 7.4
>L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 155 bits (377), Expect = 3e-38
Identities = 69/94 (73%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTNG 206
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KAKRR T G
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 207 TGRMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 305
TGRMRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 155 bits (377), Expect = 3e-38
Identities = 69/94 (73%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTNG 206
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KAKRR T G
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 207 TGRMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 305
TGRMRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein.
Length = 97
Score = 155 bits (377), Expect = 3e-38
Identities = 69/94 (73%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTNG 206
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KAKRR T G
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 207 TGRMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 305
TGRMRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein.
Length = 97
Score = 155 bits (377), Expect = 3e-38
Identities = 69/94 (73%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTNG 206
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KAKRR T G
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 207 TGRMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 305
TGRMRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 155 bits (377), Expect = 3e-38
Identities = 69/94 (73%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTNG 206
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KAKRR T G
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 207 TGRMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 305
TGRMRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 155 bits (377), Expect = 3e-38
Identities = 69/94 (73%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTNG 206
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KAKRR T G
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 207 TGRMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 305
TGRMRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 153 bits (371), Expect = 2e-37
Identities = 68/94 (72%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
Frame = +3
Query: 27 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTNG 206
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KAKRR T G
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 207 TGRMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 305
TGRM HLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMSHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>AB007183-1|BAA25842.1| 27|Homo sapiens ribosomal protein L37
protein.
Length = 27
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +3
Query: 168 HWSVKAKRRKTNGTGRMRHLKIVRRRF 248
+WS KAKRR T GTGRMRHLKIV RRF
Sbjct: 1 NWSAKAKRRNTTGTGRMRHLKIVYRRF 27
>AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 436
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 119 IKMRPMWISCSKITILPLVSEG*AQED*W 205
IK RP W CSK LP V+E ++ W
Sbjct: 253 IKRRPPWQICSKFGALPFVAEKPSRTTSW 281
>AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 360
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 119 IKMRPMWISCSKITILPLVSEG*AQED*W 205
IK RP W CSK LP V+E ++ W
Sbjct: 177 IKRRPPWQICSKFGALPFVAEKPSRTTSW 205
>BC033448-1|AAH33448.1| 460|Homo sapiens chromosome 6 open reading
frame 182 protein.
Length = 460
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 119 IKMRPMWISCSKITILPLVSE 181
IK RP W CSK LP V+E
Sbjct: 253 IKRRPPWQICSKFGALPFVAE 273
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,910,394
Number of Sequences: 237096
Number of extensions: 928446
Number of successful extensions: 1903
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1903
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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