Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29n15
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 169 1e-42
Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical p... 113 1e-25
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 31 0.93
U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,... 29 3.7
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 27 8.6
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 27 8.6
Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 27 8.6
AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p4... 27 8.6
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 169 bits (411), Expect = 1e-42
Identities = 91/192 (47%), Positives = 117/192 (60%), Gaps = 3/192 (1%)
Frame = +2
Query: 74 VGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIAS 250
V DVK+ GL N LAE+++ +G+ S D Q+F +G AP A+ P+V RWY +AS
Sbjct: 2 VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61
Query: 251 YTPAERKTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXX 424
YT AERKTW+ G++P DLFGS
Sbjct: 62 YTDAERKTWASAGGSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEER 109
Query: 425 LKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGY 604
L AYA+KK+KK IAKSS++LDVKPWDDETD+ EME VR+IEM+GL+WG +KL+P+GY
Sbjct: 110 LAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGY 169
Query: 605 GINKLQIMCVIE 640
GI KLQI+ VIE
Sbjct: 170 GIKKLQIITVIE 181
>Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical
protein Y41E3.10a protein.
Length = 263
Score = 113 bits (271), Expect = 1e-25
Identities = 54/93 (58%), Positives = 65/93 (69%)
Frame = +2
Query: 362 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 541
DLFGS L AYA KK+ K IAKSS++LDVKPWDDETD+ EME
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198
Query: 542 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIE 640
VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIE
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIE 231
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 263 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 126
QP CM + + VV+ PAP Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical protein
M01F1.7 protein.
Length = 1034
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 80 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 259
D + G D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P
Sbjct: 866 DPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEP 925
Query: 260 AERKT 274
++K+
Sbjct: 926 LKQKS 930
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 80 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 259
D + G D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P
Sbjct: 866 DPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEP 925
Query: 260 AERKT 274
++K+
Sbjct: 926 LKQKS 930
>U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,
short chain protein27 protein.
Length = 816
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 479 SILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGY 604
SI+L VKP DDE ++++ NQ M G LW A++ Y
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSY 471
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 263 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 126
QP CM + + VV+ PA Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 218 HVLRWYNQIASYTPAERKTWSQGTSP 295
H+L +Q+ S TPA W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 580 LQTCACWVWHK*TANYVCH 636
LQ CA W+WHK NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 580 LQTCACWVWHK*TANYVCH 636
LQ CA W+WHK NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204
>Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical
protein D1046.4 protein.
Length = 583
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = -3
Query: 562 FHFNSAYLVFHFLHIGFIIPWLDIKENRGLGNESWFLRLLVSICFQTFFSNSFSFCILFL 383
FHF+ +++ + + W + ++ + + ++L ++V I F+ SF+ IL L
Sbjct: 391 FHFDIQLILYAAIFAFLSLTWPSVFKSSNIISNKYYLPVMVRIHVVLFYFGSFASNILPL 450
Query: 382 V 380
V
Sbjct: 451 V 451
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 218 HVLRWYNQIASYTPAERKTWSQGTSP 295
H+L +Q+ S TPA W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549
>AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p450
family protein 25A5 protein.
Length = 477
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 98 GLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPA 205
G+N LNQ L + +Y +G+ +++ V GK A
Sbjct: 93 GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,083,536
Number of Sequences: 27780
Number of extensions: 277426
Number of successful extensions: 823
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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