Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29n01
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    28   0.24 
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   2.2  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    24   5.1  

>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
 Frame = -3

Query: 675 VKEMIKY-AQVCNIIYFLNTFQVNVLFITRM*--VQILSIAFFIS---ELDRNCVILSRI 514
           +KE +KY  Q+   ++ LN+   ++  +  +   + + ++ F +S   +L +  +I S I
Sbjct: 230 LKECLKYHKQIIQYVHDLNSLVTHLCLLEFLSFGMMLCALLFLLSISNQLAQMIMIGSYI 289

Query: 513 FPLICQLFKFYRH 475
           F ++ Q+F FY H
Sbjct: 290 FMILSQMFAFYWH 302


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 523  EDYTVPVEFTDEEGYG---KYLDLHSCYEKYINLKGIEKVDYITYL 651
            +DY +       +G G   K  +LH  +   +NL+ I+KV   T+L
Sbjct: 933  QDYQLNCNIKTVDGKGATWKQKELHGTHTHQLNLEHIDKVSSSTWL 978


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 374 YQHCQVHMSSRSSIRD 421
           YQ C+++ S R+++RD
Sbjct: 64  YQQCRINASERANLRD 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,666
Number of Sequences: 2352
Number of extensions: 13150
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)