Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29n01
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60 pr... 263 4e-70
U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein. 263 4e-70
BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a, sub... 263 4e-70
BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a, sub... 263 4e-70
AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a, sub... 263 4e-70
AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a, sub... 263 4e-70
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 32 2.2
BC130564-1|AAI30565.1| 905|Homo sapiens KIAA1524 protein. 31 3.8
BC017659-1|AAH17659.1| 285|Homo sapiens KIAA1524 protein protein. 31 3.8
AK022912-1|BAB14305.1| 472|Homo sapiens protein ( Homo sapiens ... 31 3.8
AF334474-1|AAL11632.1| 905|Homo sapiens p90 autoantigen protein. 31 3.8
AB040957-1|BAA96048.1| 884|Homo sapiens KIAA1524 protein protein. 31 3.8
Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory elem... 30 8.8
Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory elem... 30 8.8
Z97054-1|CAI42644.1| 1196|Homo sapiens upstream regulatory eleme... 30 8.8
Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory eleme... 30 8.8
DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase ... 30 8.8
BC063505-1|AAH63505.1| 388|Homo sapiens HUWE1 protein protein. 30 8.8
AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein. 30 8.8
AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1 p... 30 8.8
AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory ele... 30 8.8
AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory ele... 30 8.8
AL592046-1|CAI39578.1| 1196|Homo sapiens upstream regulatory ele... 30 8.8
AK223167-1|BAD96887.1| 439|Homo sapiens E3 ubiquitin protein li... 30 8.8
AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LAS... 30 8.8
AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein. 30 8.8
>X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60
protein.
Length = 501
Score = 263 bits (645), Expect = 4e-70
Identities = 121/172 (70%), Positives = 142/172 (82%)
Frame = +1
Query: 166 SIF*QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYE 345
+I QQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++LY+
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 346 DKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPAE 525
DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP+E
Sbjct: 63 DKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSE 122
Query: 526 DYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIP 681
+ VEFTDEEGYG+YLDLH CY KYINLK EK+DYITYLSIFD LFDIP
Sbjct: 123 EAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein.
Length = 501
Score = 263 bits (645), Expect = 4e-70
Identities = 121/172 (70%), Positives = 142/172 (82%)
Frame = +1
Query: 166 SIF*QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYE 345
+I QQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++LY+
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 346 DKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPAE 525
DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP+E
Sbjct: 63 DKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSE 122
Query: 526 DYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIP 681
+ VEFTDEEGYG+YLDLH CY KYINLK EK+DYITYLSIFD LFDIP
Sbjct: 123 EAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 263 bits (645), Expect = 4e-70
Identities = 121/172 (70%), Positives = 142/172 (82%)
Frame = +1
Query: 166 SIF*QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYE 345
+I QQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++LY+
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 346 DKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPAE 525
DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP+E
Sbjct: 63 DKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSE 122
Query: 526 DYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIP 681
+ VEFTDEEGYG+YLDLH CY KYINLK EK+DYITYLSIFD LFDIP
Sbjct: 123 EAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 263 bits (645), Expect = 4e-70
Identities = 121/172 (70%), Positives = 142/172 (82%)
Frame = +1
Query: 166 SIF*QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYE 345
+I QQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++LY+
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 346 DKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPAE 525
DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP+E
Sbjct: 63 DKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSE 122
Query: 526 DYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIP 681
+ VEFTDEEGYG+YLDLH CY KYINLK EK+DYITYLSIFD LFDIP
Sbjct: 123 EAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 263 bits (645), Expect = 4e-70
Identities = 121/172 (70%), Positives = 142/172 (82%)
Frame = +1
Query: 166 SIF*QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYE 345
+I QQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++LY+
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 346 DKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPAE 525
DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP+E
Sbjct: 63 DKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSE 122
Query: 526 DYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIP 681
+ VEFTDEEGYG+YLDLH CY KYINLK EK+DYITYLSIFD LFDIP
Sbjct: 123 EAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a,
subunit 3 variant protein.
Length = 501
Score = 263 bits (645), Expect = 4e-70
Identities = 121/172 (70%), Positives = 142/172 (82%)
Frame = +1
Query: 166 SIF*QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYE 345
+I QQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++LY+
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 346 DKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPAE 525
DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP+E
Sbjct: 63 DKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSE 122
Query: 526 DYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIP 681
+ VEFTDEEGYG+YLDLH CY KYINLK EK+DYITYLSIFD LFDIP
Sbjct: 123 EAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 31.9 bits (69), Expect = 2.2
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +1
Query: 178 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYI---EASIRLKE---L 339
+Q +ER+R +E+LH++ G R+ + + RL+ +R E +RL+E L
Sbjct: 1308 EQPLLRQERDRKFRE--EELLHQEQG-RKFLEEEQRLREERERKFLKEEQQLRLEEREQL 1364
Query: 340 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRK 450
+D+D +EE LS ++F +Q++ R+
Sbjct: 1365 RQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERE 1401
>BC130564-1|AAI30565.1| 905|Homo sapiens KIAA1524 protein.
Length = 905
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/66 (21%), Positives = 37/66 (56%)
Frame = +1
Query: 187 SYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRK 366
S E+ E+++ ++++ +K + ++ +H+L NLH + ++K L ++++ ++
Sbjct: 768 SLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKTLQKERED-KE 826
Query: 367 EEISAL 384
E I L
Sbjct: 827 ETIDIL 832
>BC017659-1|AAH17659.1| 285|Homo sapiens KIAA1524 protein protein.
Length = 285
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/66 (21%), Positives = 37/66 (56%)
Frame = +1
Query: 187 SYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRK 366
S E+ E+++ ++++ +K + ++ +H+L NLH + ++K L ++++ ++
Sbjct: 148 SLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKTLQKERED-KE 206
Query: 367 EEISAL 384
E I L
Sbjct: 207 ETIDIL 212
>AK022912-1|BAB14305.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ12850 fis, clone NT2RP2003394, weakly similar to
INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1. ).
Length = 472
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/66 (21%), Positives = 37/66 (56%)
Frame = +1
Query: 187 SYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRK 366
S E+ E+++ ++++ +K + ++ +H+L NLH + ++K L ++++ ++
Sbjct: 335 SLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKTLQKERED-KE 393
Query: 367 EEISAL 384
E I L
Sbjct: 394 ETIDIL 399
>AF334474-1|AAL11632.1| 905|Homo sapiens p90 autoantigen protein.
Length = 905
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/66 (21%), Positives = 37/66 (56%)
Frame = +1
Query: 187 SYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRK 366
S E+ E+++ ++++ +K + ++ +H+L NLH + ++K L ++++ ++
Sbjct: 768 SLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKTLQKERED-KE 826
Query: 367 EEISAL 384
E I L
Sbjct: 827 ETIDIL 832
>AB040957-1|BAA96048.1| 884|Homo sapiens KIAA1524 protein protein.
Length = 884
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/66 (21%), Positives = 37/66 (56%)
Frame = +1
Query: 187 SYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRK 366
S E+ E+++ ++++ +K + ++ +H+L NLH + ++K L ++++ ++
Sbjct: 747 SLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKTLQKERED-KE 805
Query: 367 EEISAL 384
E I L
Sbjct: 806 ETIDIL 811
>Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 3407
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 3036 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 3084
>Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>Z97054-1|CAI42644.1| 1196|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 1196
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 825 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 873
>Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase
protein.
Length = 4374
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>BC063505-1|AAH63505.1| 388|Homo sapiens HUWE1 protein protein.
Length = 388
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 17 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 65
>AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein.
Length = 4374
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1
protein.
Length = 4374
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 3407
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 3036 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 3084
>AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>AL592046-1|CAI39578.1| 1196|Homo sapiens upstream regulatory
element binding protein 1 (UREB1) protein.
Length = 1196
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 825 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 873
>AK223167-1|BAD96887.1| 439|Homo sapiens E3 ubiquitin protein
ligase URE-B1 variant protein.
Length = 439
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 68 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 116
>AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LASU1
protein.
Length = 3360
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 2989 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 3037
>AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein.
Length = 3192
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 492
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 2821 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 2869
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,143,400
Number of Sequences: 237096
Number of extensions: 1629553
Number of successful extensions: 4057
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4057
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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