Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29n01
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 176 1e-44
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 31 0.58
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 31 0.58
Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical pr... 31 0.58
AC006713-4|AAK68404.1| 321|Caenorhabditis elegans Hypothetical ... 31 1.0
AL117206-4|CAB60447.1| 447|Caenorhabditis elegans Hypothetical ... 30 1.8
Z50872-4|CAA90757.2| 498|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 29 4.1
Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical pr... 28 5.4
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 27 9.4
U22833-3|AAA64323.2| 387|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 176 bits (428), Expect = 1e-44
Identities = 78/166 (46%), Positives = 118/166 (71%)
Frame = +1
Query: 184 RSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLR 363
R+ HEERER +D VKE + +K H+ +N++ R+K DRY S L + Y+D+DG +
Sbjct: 9 RNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKFYKDEDGSK 68
Query: 364 KEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENPAEDYTVPV 543
E+ ++SGP+EF EFYSRLK IK+ HR++P+E++ P++VEF+++ + NP V
Sbjct: 69 SMEMDSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINEEIINPERAEPDMV 128
Query: 544 EFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIFDHLFDIP 681
EF+DEE YG++LDLH+ Y+K+INLK I++VDY+TYL F+ +IP
Sbjct: 129 EFSDEEAYGRFLDLHAQYDKFINLKNIKRVDYMTYLLNFEKFTEIP 174
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 31.5 bits (68), Expect = 0.58
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Frame = +1
Query: 178 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDG 357
Q + ++ E+T+ + EI +K H E + ++R+K R S L E + D
Sbjct: 195 QSQENLDDLEKTVQNLKVEI--EKLKH-ERFDFENRMKIAEKRVESLSSNLSESKQQGDM 251
Query: 358 LRKEEISALSGPHEFQEFYSRLK----QIKEFHRKHPNEI------SVPMSVEFEELANQ 507
LRK+ I A H Q++ +L+ +++ R+ +++ + M+ +FEE +
Sbjct: 252 LRKQLIQAKDDKHIIQQYEVKLQTSTAELERRLRESEHDVERLRTSQLEMATKFEEAS-- 309
Query: 508 RENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIE 627
REN D ++ ++ + C E+ LKG+E
Sbjct: 310 REN--TDLLSKIDILQDQLSLEEDRRKLCEEQIDRLKGVE 347
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 31.5 bits (68), Expect = 0.58
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Frame = +1
Query: 178 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDG 357
Q + ++ E+T+ + EI +K H E + ++R+K R S L E + D
Sbjct: 195 QSQENLDDLEKTVQNLKVEI--EKLKH-ERFDFENRMKIAEKRVESLSSNLSESKQQGDM 251
Query: 358 LRKEEISALSGPHEFQEFYSRLK----QIKEFHRKHPNEI------SVPMSVEFEELANQ 507
LRK+ I A H Q++ +L+ +++ R+ +++ + M+ +FEE +
Sbjct: 252 LRKQLIQAKDDKHIIQQYEVKLQTSTAELERRLRESEHDVERLRTSQLEMATKFEEAS-- 309
Query: 508 RENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIE 627
REN D ++ ++ + C E+ LKG+E
Sbjct: 310 REN--TDLLSKIDILQDQLSLEEDRRKLCEEQIDRLKGVE 347
>Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical
protein F19C6.2b protein.
Length = 449
Score = 31.5 bits (68), Expect = 0.58
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = +1
Query: 199 ERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEIS 378
ER + ++E + KT R+ + RL N HDR + + + D D ++
Sbjct: 146 ERPDILSLAIREFV--KTDERKIKELEKRLANEHDR-----VMIHTIINDTDWKEVTAVA 198
Query: 379 ALSGPHEF--QEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRE 513
+ P + L E H PN + VP+S F+++ ++ E
Sbjct: 199 DIESPTDIVSHRVSLALLAFDEKHSSIPNGVDVPVSGLFQKVGDRFE 245
>Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical
protein F19C6.2a protein.
Length = 495
Score = 31.5 bits (68), Expect = 0.58
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = +1
Query: 199 ERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEIS 378
ER + ++E + KT R+ + RL N HDR + + + D D ++
Sbjct: 192 ERPDILSLAIREFV--KTDERKIKELEKRLANEHDR-----VMIHTIINDTDWKEVTAVA 244
Query: 379 ALSGPHEF--QEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRE 513
+ P + L E H PN + VP+S F+++ ++ E
Sbjct: 245 DIESPTDIVSHRVSLALLAFDEKHSSIPNGVDVPVSGLFQKVGDRFE 291
>AC006713-4|AAK68404.1| 321|Caenorhabditis elegans Hypothetical
protein Y119D3A.1 protein.
Length = 321
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 274 ADHRLKNLHDRYIEASIRL-KELYEDKDGLRKEEISALSGPHEFQEFYSR 420
A + L+ +E S +L LYED + EE++ SG EF++FY +
Sbjct: 109 AKNNATELYFSSLEKSNKLGASLYEDSENAGAEEMNISSGTIEFKDFYHK 158
>AL117206-4|CAB60447.1| 447|Caenorhabditis elegans Hypothetical
protein Y67A10A.6 protein.
Length = 447
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = +1
Query: 328 LKELYEDKDGLRKEEISALSGPHEFQEFYSRLK-QIKEFHRKHPNEISVPMSVEFEELAN 504
+KE + K G K+ ++ SG + Y+R+K K +H E +P + F+
Sbjct: 256 IKECHHCKGG-GKKPCTSCSGTGSVRN-YTRIKVYFKNEKSEHYTESEIPEKLLFQAEGK 313
Query: 505 QRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKV 633
+ +DY +P+ EE K L C + G+ +V
Sbjct: 314 RIFEEEQDYIIPISQYQEEDVNKMSKLF-CAQHLQKCMGVCRV 355
>Z50872-4|CAA90757.2| 498|Caenorhabditis elegans Hypothetical
protein C05D12.1 protein.
Length = 498
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -3
Query: 549 ELDRNCVILSRIFPLICQLFKFYRHGYRYF 460
+L R+ +ILS + +IC LF FY+ G+ ++
Sbjct: 284 QLHRDMMILSVVIQVICVLFIFYQAGWVWY 313
>Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical
protein C33A12.6 protein.
Length = 520
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 490 EELANQRENPAEDYTVPVEFTDEEGYGKYLDLHSCYEKYINLKGIEKVDYITYLSIF 660
E L NQ NP E VEF G LD + ++ YI ++ + + +S+F
Sbjct: 435 EMLTNQPTNPKETLIKYVEFAARFGKLPSLDNYGRHQSYIEYFFLDIIAILAVISLF 491
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Frame = +1
Query: 274 ADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFY-------SRLKQI 432
A+ L + ++Y + S +K+ ++KD + K + EFQ+ ++K++
Sbjct: 702 AEDTLAKIENKYKKESEEVKKTGKNKDKVEKTKEEVEKAKEEFQKVKEEFQKEVEKVKKV 761
Query: 433 -KEFHRKHPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDEEGY 567
KE + ++ V + L N RE E + F D G+
Sbjct: 762 EKELEKAKESDFKVYLDDVRRSLKNVRETIEETRKYEIRFLDSLGF 807
>Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical
protein F54B11.6 protein.
Length = 183
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 190 YHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRL---KELYEDKDGL 360
YH+ RE+++ A+ +++ H+E + R++ D ++ I L KE E K
Sbjct: 48 YHDSREKSLVALTEKL------HQEFMEDQERVR--RDLLVQFKIELDQTKEELEKKHAE 99
Query: 361 R-KEEISALSGPHEFQEFYSRLKQ 429
KEEI LS H+ + ++ KQ
Sbjct: 100 NLKEEIEKLSEKHQRELAVAKKKQ 123
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 430 IKEFHRKHPNEISVPMSVEFEELANQRENPAEDYTVPVEFTDEEGY 567
++E H + P S F E + P + T P T EE Y
Sbjct: 316 VEESHFEEPAPAPAATSAPFVEPVTEESKPGYEQTAPAVETKEESY 361
>U22833-3|AAA64323.2| 387|Caenorhabditis elegans Hypothetical
protein W02B3.4 protein.
Length = 387
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -3
Query: 225 HCVHGSFPFLMVASLLLKYASTQL-NQL 145
H V SFPFL+++S+L+ Y +T NQL
Sbjct: 4 HFVLFSFPFLLLSSMLIFYQTTVFRNQL 31
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,195,869
Number of Sequences: 27780
Number of extensions: 280891
Number of successful extensions: 948
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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