Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29m15
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AL132952-4|CAB61136.1| 185|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical pr... 49 4e-06
U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein. 49 4e-06
AF016417-1|AAK68335.1| 241|Caenorhabditis elegans Hypothetical ... 48 6e-06
AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical ... 38 0.007
Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical pr... 34 0.082
Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical pr... 34 0.082
Z68301-1|CAA92624.1| 360|Caenorhabditis elegans Hypothetical pr... 34 0.11
X72943-1|CAA51448.1| 360|Caenorhabditis elegans Wnt-2 protein p... 34 0.11
U12965-1|AAA20611.1| 176|Caenorhabditis elegans Hypothetical pr... 33 0.19
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 33 0.25
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 31 0.77
AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP transcri... 31 1.0
AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP transcri... 31 1.0
AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal ever... 31 1.0
AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal ever... 31 1.0
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 30 1.8
Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.1
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 29 3.1
AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical ... 27 9.4
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = +3
Query: 594 KDDGYWDRRRRNNEAAKRSREKRRFNDMVL 683
KD+ YW+RRRRNN+A++RSREKRR ND+ +
Sbjct: 53 KDEHYWERRRRNNDASRRSREKRRQNDLAM 82
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/26 (69%), Positives = 18/26 (69%)
Frame = +3
Query: 588 SKKDDGYWDRRRRNNEAAKRSREKRR 665
S K Y DRRRRNNEAAKR R RR
Sbjct: 326 SNKSPQYVDRRRRNNEAAKRCRANRR 351
>AL132952-4|CAB61136.1| 185|Caenorhabditis elegans Hypothetical
protein Y51H4A.4 protein.
Length = 185
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +3
Query: 456 SPHFPMDQAPPSNGSSGDSHDYGAFDFKRKDFFGQRKQREF-IPDSKKDDGYWDRRRRNN 632
+PH +P S+ +S + ++ G +K++ +P+++KD+ Y DRRRRNN
Sbjct: 59 NPHATSSFSPSSSSTSSTTSSQN----QQSGSSGSKKKKPVPVPENQKDEAYLDRRRRNN 114
Query: 633 EAAKRSREKRR 665
EAA++SRE R+
Sbjct: 115 EAARKSRESRK 125
>Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical
protein ZK909.4 protein.
Length = 211
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +3
Query: 561 RKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRR 665
RK IP+ KKD Y++RRR+NN+AAKRSR+ RR
Sbjct: 104 RKMSVPIPEEKKDSAYFERRRKNNDAAKRSRDARR 138
>U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein.
Length = 211
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +3
Query: 561 RKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRR 665
RK IP+ KKD Y++RRR+NN+AAKRSR+ RR
Sbjct: 104 RKMSVPIPEEKKDSAYFERRRKNNDAAKRSRDARR 138
>AF016417-1|AAK68335.1| 241|Caenorhabditis elegans Hypothetical
protein F17A9.3 protein.
Length = 241
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = +3
Query: 489 SNGSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRRF 668
S SS DS + +D R + + D KD YW+RRR+NN+AAKRSR++RR
Sbjct: 80 SRDSSHDSSSPTSTGGSSRDNVIVRNELKRKKDQVKDVAYWERRRKNNDAAKRSRDQRRM 139
Query: 669 ND 674
+
Sbjct: 140 KE 141
>AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical
protein C48E7.11 protein.
Length = 100
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 555 GQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRR 665
G RK+ P +D Y +R+RNNEA R+R+K+R
Sbjct: 3 GNRKRNTSEPREDDEDDYSTKRKRNNEAVNRTRQKKR 39
>Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 34.3 bits (75), Expect = 0.082
Identities = 14/37 (37%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +3
Query: 561 RKQREF--IPDSKKDDGYWDRRRRNNEAAKRSREKRR 665
+K+R++ + + +KD+ Y +R +NN A KR REK++
Sbjct: 166 KKERKYEKVSEDQKDEKYSSKREKNNLAVKRCREKKK 202
>Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 34.3 bits (75), Expect = 0.082
Identities = 14/37 (37%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +3
Query: 561 RKQREF--IPDSKKDDGYWDRRRRNNEAAKRSREKRR 665
+K+R++ + + +KD+ Y +R +NN A KR REK++
Sbjct: 166 KKERKYEKVSEDQKDEKYSSKREKNNLAVKRCREKKK 202
>Z68301-1|CAA92624.1| 360|Caenorhabditis elegans Hypothetical
protein W01B6.1 protein.
Length = 360
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 495 GSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRR 665
G GD+ +YG + F R DF R ++E P D+G RRNNEA ++ ++ R
Sbjct: 156 GGCGDNVEYG-YKFSR-DFIDIR-EKEHDPKRNHDNGRSLMNRRNNEAGRKILKRHR 209
>X72943-1|CAA51448.1| 360|Caenorhabditis elegans Wnt-2 protein
protein.
Length = 360
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 495 GSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRR 665
G GD+ +YG + F R DF R ++E P D+G RRNNEA ++ ++ R
Sbjct: 156 GGCGDNVEYG-YKFSR-DFIDIR-EKEHDPKRNDDNGRSLMNRRNNEAGRKILKRHR 209
>U12965-1|AAA20611.1| 176|Caenorhabditis elegans Hypothetical
protein F23F12.9a protein.
Length = 176
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 585 DSKKDDGYWDRRRRNNEAAKRSREKRRFND 674
D K+ Y ++R +NNEAAK+SR R+ +
Sbjct: 61 DPKRSPKYLEKRMKNNEAAKKSRASRKHRE 90
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 498 SSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRR 665
S DS DF +K + + +R DS DD +RRR+ ++ +K+S++ ++
Sbjct: 217 SVSDSDSDSDSDFDKKKWKKNKAKRSKRDDSSDDDSEMERRRKKSKKSKKSKKFKK 272
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +3
Query: 537 KRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRR 665
++K+ +R++R+ DS D DR+R+ ++ +K+ + KRR
Sbjct: 154 RKKERKEKRRRRDDSDDSSDSDEEEDRKRKKSKESKKEKRKRR 196
>AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP
transcription factor FOS-1b protein.
Length = 331
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 540 RKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKR 662
+K G++ + E + DD RR+RN EAA R R++R
Sbjct: 8 KKSSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRR 48
>AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP
transcription factor FOS-1a protein.
Length = 467
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 540 RKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKR 662
+K G++ + E + DD RR+RN EAA R R++R
Sbjct: 144 KKSSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRR 184
>AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform a protein.
Length = 331
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 540 RKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKR 662
+K G++ + E + DD RR+RN EAA R R++R
Sbjct: 8 KKSSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRR 48
>AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform b protein.
Length = 467
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 540 RKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKR 662
+K G++ + E + DD RR+RN EAA R R++R
Sbjct: 144 KKSSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRR 184
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 492 NGSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRR 665
+GS DS D KRK ++KQ E D KK++ D+++++ + + E+ +
Sbjct: 106 SGSDSDSSDSSEDKKKRKQMRDKKKQEE--EDKKKEEEEKDKKKKDKKKEEDDEEEEQ 161
>Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical
protein F23A7.5 protein.
Length = 632
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 486 PSNGSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKKDDGY--WDRRRRNNEAAKRSR 653
P +G S ++ KRKD + + R DS DD Y + R++ + KR R
Sbjct: 95 PRDGGRCSSTEFELLVIKRKDAYLDHRARNCYIDSATDDDYDSYKERKKFENSGKRRR 152
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 516 DYGAFDFKRKDFFGQRKQREFIPDSKKDDGYWDRRRRN-NEAAKRSREKRRFND 674
D D +R+D G R++ + D ++DD D RR + E+ +RS R D
Sbjct: 855 DRSQIDRRRQDDMGARRRSRWGDDDRRDDDRRDDRRDDRRESRRRSPRSPRSPD 908
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = +3
Query: 474 DQAPPSNGSSGDSHD----YGAF--DFKRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNE 635
D+ + SG++H+ + F DF D + +Q + D+ + D +R+R+ E
Sbjct: 813 DEDEEAESKSGETHEQEEEFNPFMCDFTNDDPWAHNQQ--IVEDTPQKDRKAKKRKRDEE 870
Query: 636 AAKRSREKRR 665
A+R REK R
Sbjct: 871 EAERLREKVR 880
>AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical
protein C15F1.5b protein.
Length = 311
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Frame = -1
Query: 681 GPCR*SGVFRETAWLPRC----CASCGP--SSRRPFC 589
GPC+ + VF +T +P C C CGP ++ R FC
Sbjct: 50 GPCKKALVFDKTIVIPCCGARMCDVCGPKWTNGRDFC 86
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Frame = -1
Query: 681 GPCR*SGVFRETAWLPRC----CASCGP--SSRRPFC 589
GPC+ + VF +T +P C C CGP ++ R FC
Sbjct: 120 GPCKKALVFDKTIVIPCCGARMCDVCGPKWTNGRDFC 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,825,683
Number of Sequences: 27780
Number of extensions: 251858
Number of successful extensions: 835
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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